Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30276X
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 163 3e-41
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 158 1e-39
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 156 5e-39
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 153 3e-38
03_01_0034 + 318432-318825,318902-319851 45 2e-05
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 44 5e-05
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 44 5e-05
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 43 6e-05
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 43 8e-05
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 43 8e-05
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 43 8e-05
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 42 1e-04
03_02_0747 + 10888358-10888481,10888529-10888609,10889011-108892... 30 0.45
05_03_0086 + 8279518-8280320,8280923-8281844 29 1.1
05_02_0137 + 6996336-6996415,6998240-6998351,6999292-6999453,699... 29 1.4
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 28 2.4
08_02_1230 + 25419533-25420446,25421098-25421279,25422197-254225... 27 5.6
03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117... 27 5.6
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 27 5.6
01_01_1141 + 9052511-9052573,9052626-9052928 27 5.6
12_02_0372 + 18212948-18213821,18213887-18214030,18214128-182142... 26 7.4
10_08_0304 - 16640937-16642877 26 7.4
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 26 7.4
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 26 7.4
05_03_0009 - 7342164-7342709,7343036-7343179,7343324-7343500 26 7.4
04_01_0370 + 4861754-4862222,4862227-4862372 26 7.4
09_02_0260 - 6388903-6389481 26 9.8
08_01_0496 + 4319646-4320371,4321007-4321045 26 9.8
06_01_0095 - 785876-786376 26 9.8
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 26 9.8
02_05_0505 - 29605860-29606102,29606331-29606677,29607291-296074... 26 9.8
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 163 bits (397), Expect = 3e-41
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 1 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTA 180
VPKDVNAA+ATIKTKRT+QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAV M+SN TA
Sbjct: 324 VPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTA 383
Query: 181 IAGAWARLDHKFDLMYAKRAFVHW 252
+A ++R+DHKFDLMYAKRAFVHW
Sbjct: 384 VAEVFSRIDHKFDLMYAKRAFVHW 407
Score = 60.9 bits (141), Expect = 3e-10
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3
Query: 255 VGEGMEEGEFSEAREELAALDKDYEEVGIDSAE 353
VGEGMEEGEFSEARE+LAAL+KDYEEVG + A+
Sbjct: 409 VGEGMEEGEFSEAREDLAALEKDYEEVGAEGAD 441
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 158 bits (383), Expect = 1e-39
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = +1
Query: 1 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTA 180
VPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVP GDLAKVQRAV M+SN+T+
Sbjct: 324 VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTS 383
Query: 181 IAGAWARLDHKFDLMYAKRAFVHW 252
+ ++R+DHKFDLMY+KRAFVHW
Sbjct: 384 VVEVFSRIDHKFDLMYSKRAFVHW 407
Score = 61.3 bits (142), Expect = 2e-10
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 255 VGEGMEEGEFSEAREELAALDKDYEEVGIDSAE 353
VGEGMEEGEFSEARE+LAAL+KDYEEVG +S E
Sbjct: 409 VGEGMEEGEFSEAREDLAALEKDYEEVGAESDE 441
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 156 bits (378), Expect = 5e-39
Identities = 68/84 (80%), Positives = 78/84 (92%)
Frame = +1
Query: 1 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTA 180
VPKDVNAA+ATIKTKRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAV M+SN+T+
Sbjct: 324 VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTS 383
Query: 181 IAGAWARLDHKFDLMYAKRAFVHW 252
+ ++R+D KFDLMY+KRAFVHW
Sbjct: 384 VVEVFSRIDIKFDLMYSKRAFVHW 407
Score = 58.0 bits (134), Expect = 2e-09
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +3
Query: 255 VGEGMEEGEFSEAREELAALDKDYEEVG 338
VGEGMEEGEFSEARE+LAAL+KDYEEVG
Sbjct: 409 VGEGMEEGEFSEAREDLAALEKDYEEVG 436
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 153 bits (372), Expect = 3e-38
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +1
Query: 1 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTA 180
VPKDVNAA+ +IKT+RT+QFVDWCPTGFK GINYQPPT VPGGDLAKV+RAV M+SN TA
Sbjct: 405 VPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTA 464
Query: 181 IAGAWARLDHKFDLMYAKRAFVHW 252
+A ++R+D KFDLMYAKRAFVHW
Sbjct: 465 VAEVFSRIDRKFDLMYAKRAFVHW 488
Score = 58.4 bits (135), Expect = 1e-09
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 255 VGEGMEEGEFSEAREELAALDKDYEEVGID 344
VGEGMEEGEFSEARE+LAAL+KDYEEVG +
Sbjct: 490 VGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQ 375
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHW 397
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEE 332
R+ F GEGM+E EF+EA + L +Y++
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 43.6 bits (98), Expect = 5e-05
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLKMAATFVGNSTSIQ 375
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHW 397
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEE 332
R+ F GEGM+E EF+EA + L +Y++
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 43.6 bits (98), Expect = 5e-05
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPN--------GLKMASTFIGNSTSIQ 375
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHW 397
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEE 332
R+ F GEGM+E EF+EA + L +Y++
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 43.2 bits (97), Expect = 6e-05
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP ++ A + N+T+I
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPI--------GLKMASTFIGNSTSIQ 375
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHW 397
Score = 29.9 bits (64), Expect = 0.60
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEEVGIDSAE 353
R+ F GEGM+E EF+EA + L +Y++ +AE
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAE 431
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 42.7 bits (96), Expect = 8e-05
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 340 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPV--------GLSMASTFVGNSTSIQ 391
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 392 EMFRRVSEQFTAMFRRKAFLHW 413
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEEVGIDSAE 353
R+ F EGM+E EF+EA + L +Y++ +AE
Sbjct: 406 RRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATAE 447
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 42.7 bits (96), Expect = 8e-05
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 345 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQ 396
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 397 EMFRRVSEQFTAMFRRKAFLHW 418
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEE 332
R+ F GEGM+E EF+EA + L +Y++
Sbjct: 411 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 42.7 bits (96), Expect = 8e-05
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFIGNSTSIQ 375
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHW 397
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEE 332
R+ F GEGM+E EF+EA + L +Y++
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +1
Query: 7 KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIA 186
K+V+ + ++ K + FV+W P K + PP + A + N+T+I
Sbjct: 504 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR--------GLSMASTFVGNSTSIQ 555
Query: 187 GAWARLDHKFDLMYAKRAFVHW 252
+ R+ +F M+ ++AF+HW
Sbjct: 556 EMFRRVSEQFTAMFRRKAFLHW 577
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 228 RQACFRALVVGEGMEEGEFSEAREELAALDKDYEE 332
R+ F GEGM+E EF+EA + L +Y++
Sbjct: 570 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
>03_02_0747 +
10888358-10888481,10888529-10888609,10889011-10889227,
10889350-10889460,10889615-10889660,10889744-10889853,
10889926-10890429,10891466-10891594,10891934-10892230,
10892322-10892680,10892968-10893016,10893124-10893184,
10893429-10893578,10893659-10893796,10894525-10894805,
10895005-10895050
Length = 900
Score = 30.3 bits (65), Expect = 0.45
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 VPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ---RAVIMLSN 171
+P + IAT ++ + + W P K + Y T GGD AKV+ R ++ + N
Sbjct: 366 LPLAEDIPIATSSVRKGKRSIYWRPD--KPAMLYWVETQ-DGGD-AKVEVSPRDIVYMEN 421
Query: 172 TTAIAGAWARLDHKFDLMYAKRAFVHW*SVRVWRRESSPKPVRNWLPS 315
I G + HK DL YA ++ V+ + R W+ S
Sbjct: 422 AEPINGEQPEILHKLDLRYAGTSWCDESLALVYESWYKTRKTRTWVIS 469
>05_03_0086 + 8279518-8280320,8280923-8281844
Length = 574
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 26 SLPSKPSVLSNSSTGVQPVSRSESTTSHPPWCPEAT 133
S PSKPS S +P S+ T + PP PE T
Sbjct: 31 SAPSKPSPDKKSKPKNKPNHHSDKTANPPPQRPETT 66
>05_02_0137 +
6996336-6996415,6998240-6998351,6999292-6999453,
6999755-6999874,6999947-7000108
Length = 211
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 239 ARLAYMRSNLWSRRAQAPAMAVVLDNMMTAR 147
A L Y + WS+R P+ A VLD + R
Sbjct: 2 ATLTYSSTQYWSKRGHVPSQAKVLDRLTFKR 32
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 318 YRGQPVPHGLRRTLPPPYPHRLPVH 244
Y P LRR LPPP PH P+H
Sbjct: 87 YASSLPPSRLRR-LPPPPPHPRPIH 110
>08_02_1230 +
25419533-25420446,25421098-25421279,25422197-25422543,
25423327-25423557,25423680-25423775,25423934-25424044
Length = 626
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 347 GVNADFFVILIEGSQFLTGFGELSLLHTLTDYQCTKARLAYMRSNL-WSRRAQA 189
G NA ++ G GELSLL L Q K+ + Y RS+ S+R++A
Sbjct: 512 GSNARLLATVVAGGVLA---GELSLLSALAAGQLVKSHMKYNRSSKDMSKRSRA 562
>03_01_0149 -
1175689-1176258,1176345-1176509,1176631-1177539,
1178179-1178378,1178505-1178605,1178747-1179369,
1179451-1179546,1179637-1179798,1179889-1180068,
1180173-1180323,1180408-1180641,1180753-1180913,
1181041-1181163,1181261-1181421,1181655-1181877,
1181952-1182346,1182461-1182671,1183536-1184522
Length = 1883
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 276 PPPYPHRLPVHESTLGVHEVELVVKASP 193
PPP P +PV L + E +L V ++P
Sbjct: 82 PPPLPEPVPVAPPELPIQEKQLQVASAP 109
>01_06_0747 -
31645136-31646521,31647870-31648142,31649080-31649148,
31649486-31649614
Length = 618
Score = 26.6 bits (56), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 321 PYRGQPVPHGLRRTLPPPYPHRLPVHES 238
P + PV + +R PP YPH P H+S
Sbjct: 415 PQQHPPVQNQMRPQTPPNYPHYQP-HQS 441
>01_01_1141 + 9052511-9052573,9052626-9052928
Length = 121
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 321 PYRGQPVPHGLRRTLPPPYPHRLP 250
P G P PHG +R P RLP
Sbjct: 23 PLAGSPQPHGTKRRPVEPASRRLP 46
>12_02_0372 +
18212948-18213821,18213887-18214030,18214128-18214273,
18214854-18214862
Length = 390
Score = 26.2 bits (55), Expect = 7.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 17 TRPSLPSKPSVLSNSSTGVQPVSRSESTTSHPP 115
T S PS P++ S S VQP S S T+ PP
Sbjct: 28 TTSSTPSHPTI-SRSVPVVQPSSPSSPTSEPPP 59
>10_08_0304 - 16640937-16642877
Length = 646
Score = 26.2 bits (55), Expect = 7.4
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 64 DWCPTGFKVGINYQPPTVVPGGDLAKVQRAVIMLSNTTAIAGAWARLDHKFDLMYAKRAF 243
D C F V ++ + PT GG A+ QRA + L ++G + + +K L+ F
Sbjct: 143 DACREDFAVLVHARAPTGGGGGAAAEAQRAPLDLVTVLDVSG--SMVGNKLALLKQAMGF 200
Query: 244 V 246
V
Sbjct: 201 V 201
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 348 RSQCRLLRNPYRGQPVPHGLRRTLPPPYPHRL 253
R+ CR+ +P +P+ H L +P P+PH L
Sbjct: 287 RAACRVRASPCL-RPLAHHLLDHIPRPHPHLL 317
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 260 TDYQCTKARLAYMRSNLWSRRAQAPAMAVVLDNMMTAR 147
TDY C LAY + N W + + + +D +MT +
Sbjct: 358 TDYTCKIISLAYNKLNRWIKELRLIKVPHKVDAIMTIK 395
>05_03_0009 - 7342164-7342709,7343036-7343179,7343324-7343500
Length = 288
Score = 26.2 bits (55), Expect = 7.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 18 RGHRYHQNQAYYP-IRRLVSNRFQGRNQLPATHRGARRRLGQGSTC 152
+GH H Y P I RL+ ++F+G H+ + RL G+ C
Sbjct: 124 QGH-IHSGIYYAPYIMRLIQDKFRGARNNLKKHKQYKLRLQLGTPC 168
>04_01_0370 + 4861754-4862222,4862227-4862372
Length = 204
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 16 NAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTV 117
N AI T+ ++ WC G++++PP V
Sbjct: 171 NDAIRKASTRVHLEHTPWCRQDRASGVSFEPPIV 204
>09_02_0260 - 6388903-6389481
Length = 192
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 29 LPSKPSVLSNSSTGVQPVSRSESTTS 106
LPS+PS ++SS G P RS S
Sbjct: 16 LPSRPSSSTSSSRGAPPGKRSHEEAS 41
>08_01_0496 + 4319646-4320371,4321007-4321045
Length = 254
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 87 LETGWTPVDELDSTLGFDGSDGRV 16
L+ W P+ + L FDG +GR+
Sbjct: 42 LDAQWIPLPLIQRVLVFDGGEGRI 65
>06_01_0095 - 785876-786376
Length = 166
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 246 ALVVGEGMEEGEFSEAREELAALDKDYEEVGID 344
A+ EG +A+EEL D ++ EVGID
Sbjct: 73 AIAAAEGSSSSR--KAKEELKKFDVEFMEVGID 103
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 25.8 bits (54), Expect = 9.8
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 353 FSGVNADFFVILIEGSQFLTGFGELSLLHTLTDY-QCTKARLAYMRSNL 210
F G ADFF +L+ G+ LTG + L+ + Y T AR+ ++ ++L
Sbjct: 89 FRGRTADFFYMLLFGATVLTG---IVLIGGMIPYISETFARILFLSNSL 134
>02_05_0505 -
29605860-29606102,29606331-29606677,29607291-29607472,
29609540-29610282
Length = 504
Score = 25.8 bits (54), Expect = 9.8
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 347 GVNADFFVILIEGSQFLTGFGELSLLHTLTDYQCTKARLAYMRSN 213
G NA ++ GS GELSLL L K+ + Y RS+
Sbjct: 455 GANAKRLATIVAGSVLA---GELSLLAALASGHLVKSHMMYNRSS 496
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,774,068
Number of Sequences: 37544
Number of extensions: 228260
Number of successful extensions: 1083
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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