Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30276X
         (353 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.48 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   0.83 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   2.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   4.4  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   4.4  
Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           22   5.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   5.9  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    22   7.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   7.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 224 MRSNLWSRRAQAPAMAVVLDNM 159
           MR+N WS   +AP  A+ L  M
Sbjct: 55  MRTNRWSSHPEAPGKAIYLTRM 76


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 112  TVVPGGDLAKVQRAVIMLSNTTAIAGAWARLDHKFDLMYAKRAFV 246
            T +   D+AKV+ AV++ +    ++   A +++ +DL  A  A +
Sbjct: 991  TALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMM 1035


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 303 VPHGLRRTLP-PPYPH--RLPVHESTLGVHEVELVVKASPS 190
           +P  LR + P  PYPH  R  V E    + EVE+  ++S S
Sbjct: 323 LPFILRMSRPGEPYPHPCRPTVDEKNKQLQEVEMRERSSKS 363


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 102 VVDSDLETGWTPVDELDSTLGFDGSDGRV 16
           +VD  + + W P  ELD   GF G +  V
Sbjct: 350 IVDFCVGSLWGPKSELDVARGFVGYNATV 378


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 303 VPHGLRRTLPPPYPHRLPVHE 241
           VPH ++  +P PYP ++ V +
Sbjct: 186 VPHYVKVYIPQPYPLQVNVEQ 206


>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 12 CERGHRYHQNQAYYPIRRLV 71
          C + H  HQ +  YP+ R +
Sbjct: 18 CAQAHASHQRRVPYPLPRFL 37


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 315 RGQPVPHGLRRTLPPPYPHRLPVHESTLGVHEVE 214
           RG+P P G    L PP P   P  ++ + + +++
Sbjct: 627 RGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLK 660


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 4   PKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 99
           PKD N  +A I       F ++ P G++  ++
Sbjct: 79  PKDHNYVVAYIDRPTYAAFNEYLPRGYRTELS 110


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 4   PKDVNAAIATIKTKRTIQFVDWCPTGFKVGIN 99
           PKD N  +A I       F ++ P G++  ++
Sbjct: 79  PKDHNYVVAYIDRPTYAAFNEYLPRGYRTELS 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,237
Number of Sequences: 2352
Number of extensions: 7729
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)