Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30271
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z71267-6|CAA95850.3| 374|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical ... 41 8e-04
U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical pr... 41 0.001
AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 40 0.002
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 38 0.009
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 37 0.012
AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical ... 37 0.016
Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical pr... 35 0.049
AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane... 35 0.049
Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 34 0.086
Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 34 0.086
Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical pr... 34 0.086
AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical ... 32 0.35
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 32 0.35
Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical ... 30 1.4
Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical ... 30 1.9
Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical p... 29 3.2
M55997-1|AAA27995.1| 308|Caenorhabditis elegans cuticlin 1 prot... 29 3.2
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical p... 29 4.3
Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical p... 29 4.3
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 29 4.3
U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 7.5
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 7.5
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 28 7.5
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 28 7.5
U39994-1|AAB37019.1| 326|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 28 7.5
AF024494-10|AAB70336.1| 642|Caenorhabditis elegans Hypothetical... 28 7.5
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 27 9.9
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 27 9.9
U80838-3|AAC71113.1| 453|Caenorhabditis elegans Abnormal cell l... 27 9.9
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 27 9.9
AF183400-1|AAF13188.1| 453|Caenorhabditis elegans LIN-42 protein. 27 9.9
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +3
Query: 252 ITTKA--FHIKCIYKTGEQNVTLAFNVSMLTTAGTIA--NTGPPPTCSMRIISRSGDQVS 419
+T KA + ++C Y G + V NVS L T T+ N+ P C + + + +S
Sbjct: 2440 LTNKADSYDLRCQYPIGSRAVESHVNVSELATTSTLTEKNSTLAPICRLSVSNDQHSSIS 2499
Query: 420 SAEIGENLVLQVDVQPSSIYGGFARSCVAKQVK 518
SA +G+ L L ++V PS +G R+C A ++
Sbjct: 2500 SAMVGDTLKLALEVTPSENFGILPRNCFAINIE 2532
Score = 31.5 bits (68), Expect = 0.61
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 13 IQVECLADGVRVRL--KIKDFNGLLYVKSYSKDERCRKVVXMPKDEESFVFFTVHFGDCG 186
+ V C ADG+ + L + DF G ++VK +++ C K + F V F C
Sbjct: 2359 LSVYCEADGMTLVLGNETADFEGKIFVKGQAENPYCSKSFSSLLNSRKPYVFKVVFQHCD 2418
Query: 187 LVHV-NGLASFVLVMQTHLKLVTS 255
+ + N + +V+Q H +T+
Sbjct: 2419 VQLLDNHTMASTVVVQKHAMFLTN 2442
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +2
Query: 527 NVEN--EYLVTDDDGCAKDPAIFGEW 598
N+E+ Y +TDD GCA D ++F +W
Sbjct: 2530 NIESGERYTLTDDMGCAIDESLFPQW 2555
>Z66565-4|CAA91480.1| 384|Caenorhabditis elegans Hypothetical
protein T04F8.4 protein.
Length = 384
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCS--MRIISRSGDQVSSAEIG 434
KA+HI+C+YK + VT A +VS L T ++ + P PTCS +R G + A++G
Sbjct: 125 KAYHIRCMYKEAARTVTAAIDVSNLPTE-SVQSDLPMPTCSYTIRRDQLDGPILKYAKVG 183
Query: 435 ENLVLQVDVQPSSIYGGFARSC 500
+ +V + S YG SC
Sbjct: 184 DQVVHRWQCD-SEDYGLLVHSC 204
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 545 LVTDDDGCAKDPAIFGEWERSED-GSALRAAFNAFKFPSSDNIRFQCNIRVC 697
++ D+ GC D + G+ E A R +F FKF +RFQC IR+C
Sbjct: 215 MIIDERGCHTDRLLLGDPTYVEALNMAYRESF-VFKFADRIAVRFQCEIRLC 265
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 16 QVECLADGVRVRLKI-KDFNGLLYVK-SYSKDERCR 117
+++C AD + ++ + K FNG +YVK SY++ E CR
Sbjct: 35 EIQCNADTIDMQFRTRKQFNGKVYVKGSYNRPE-CR 69
>Z49911-1|CAA90131.2| 647|Caenorhabditis elegans Hypothetical
protein M28.1 protein.
Length = 647
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRSGDQVSSAEIGE 437
KA+HI+C Y E+ V+ +V+M T I T PP+C I ++G+ V ++ +GE
Sbjct: 301 KAYHIQCAYAEAEKTVSTDLDVNM-TDEQEINGTVEPPSCDYLISDQNGNSVQNSLVGE 358
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +2
Query: 518 VSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
V ++ V D GC D + SEDG + + FKFP + F+C I C
Sbjct: 383 VKDGAGQQFEVIDQHGCTLDQLMLQTPTYSEDGMSAQVDAYIFKFPDRSTVDFRCTITFC 442
>Z71267-6|CAA95850.3| 374|Caenorhabditis elegans Hypothetical
protein W01A8.3 protein.
Length = 374
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 539 EYLVTDDDGCAKDPAIFGEWERSEDGSALR--AAFNAFKFPSSDNIRFQCNIRVC 697
++ V D DGCA DP + E S D S +R A+ FK+ S+ + F C IR+C
Sbjct: 210 DHAVVDFDGCATDPFLLS--ELSYDASLMRAHASSQVFKYADSNQLYFTCQIRLC 262
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Frame = +3
Query: 165 CTFRRLRPCSCQWLSKLRSSNANSSETGNITT--KAFHIKCIYKTGEQNVTLAFNVSMLT 338
C +RLR + + ++ + + + G IT +AFH+KC Y ++ VT +VSM+
Sbjct: 88 CGMQRLRSANPRGVNFMVTVIVSFHPAGFITKNDRAFHVKCFYMEPDEIVTQNIDVSMIP 147
Query: 339 TAGTIANTGPPPTC--SMRIISRSGDQVSSAEIGENLVLQVDVQPSSIYGGFARSC 500
T ++++ P C S+R +G ++ A +G+ + + P+ + G + C
Sbjct: 148 TT-ELSDSMVMPKCEYSVRRDGPNGPTLTYANVGDIVFHVWECTPADM-GMLVKKC 201
>AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical
protein T21H3.4 protein.
Length = 518
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 542 YLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
Y + DD+GC+ D I E + + AF+F +S+++ F+C I VC
Sbjct: 324 YAIIDDNGCSLDEEIIPTPEYDIENGVIYTPSKAFRFANSNHVHFKCMISVC 375
>U39853-1|AAK39227.2| 390|Caenorhabditis elegans Hypothetical
protein F13B9.6 protein.
Length = 390
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Frame = +3
Query: 264 AFHIKCIYKTGEQNVTLA--FN-------VSMLTTAGTIANTGPPPTCSMRIISR---SG 407
A ++KCIY T + +TL FN +M + +G P +M+I+ SG
Sbjct: 109 AINVKCIYATQDITLTLPPIFNGTNALQITAMNDDNSVVTGSGGSPALTMQILEGHGISG 168
Query: 408 DQVSSAEIGENLVLQVDVQPSSIYGGFARSCVA 506
V A +G+ + L + +Q ++IY + SC A
Sbjct: 169 SPVVKAAVGQRITLDIALQNTAIYDFYVHSCYA 201
>AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical
protein Y53H1B.1 protein.
Length = 403
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 554 DDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
D+ GCA DP I + ++D + A N FKF + FQC + C
Sbjct: 215 DEHGCAIDPLILPDLTYNKDNNVAYAQVNTFKFADKVSTYFQCAVSTC 262
Score = 36.7 bits (81), Expect = 0.016
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTC--SMRIISRSGDQVSSAEIG 434
+A+ C Y ++ VT F+VSML T I +T P C S+R S +G V A++G
Sbjct: 121 RAYRCTCFYMEADKVVTNKFDVSMLPTTDLI-DTARMPLCTYSVRRDSITGPIVEFAKVG 179
Query: 435 ENLVLQVDVQPSSIYGGFARSC 500
E V V S ++ SC
Sbjct: 180 ET-VYHVWNCESDMFSMLVHSC 200
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 494 QLRCKTSEVSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIR 673
Q+ +V E V ++GC++D I +E+ + NAF FP +N+R
Sbjct: 186 QMEVYNCDVVGGEEYSKKVIGENGCSEDIYIMPNLIYNENRTKAFVNSNAFNFPDQNNVR 245
Query: 674 FQCNIRVC 697
C I VC
Sbjct: 246 ISCKISVC 253
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRS--GDQVSSAEIG 434
+A+ ++C YK E+ V +VS T + + P P CS I S G A++G
Sbjct: 113 RAYKLRCFYKEAEKAVGAEVSVSDPTPV-QLEDESPQPVCSYTIHKESPNGPIAKFAQLG 171
Query: 435 ENLVLQVDVQPSSIY 479
+ ++ V PS Y
Sbjct: 172 D-VLYHVWECPSEAY 185
>Z99278-7|CAB16488.1| 382|Caenorhabditis elegans Hypothetical
protein Y53C12B.6 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 485 FCTQLRCKTSEVSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSD 664
+C Q+ T+E + + V D++GC D + + E A+ +AFKF +
Sbjct: 202 YCIQVYSCTAEDGGS--DTVQVVDENGCTTDGELLSPIKYKEGSMRAAASSHAFKFVDNH 259
Query: 665 NIRFQCNIRV 694
+ F+CNIR+
Sbjct: 260 IVYFKCNIRI 269
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 521 STNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
S +VE ++ D GC+ D A+ + ++D AA + F +++++F C + +C
Sbjct: 1084 SDDVERKFAFVDPRGCSSDLALLTDLTYADDSLTAWAASHVFNVHDAESLKFVCKLSLC 1142
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +1
Query: 13 IQVECLADGVRVRLKIK-DFNGLLYVKSYSKDERCRKVVXMPKDEESFVFFTVHFGDCGL 189
I +EC+ DG +V++ F G+ VK Y D RC+ F + +CG+
Sbjct: 906 IDLECVGDGFKVQVNPPAGFRGVAVVKGYQDDARCKATASSSLPLNLF----ISNNECGV 961
Query: 190 VHV-----NGLASFVLVMQTH 237
V NGL S +++ H
Sbjct: 962 TQVKSSDPNGLNSSLVLHLLH 982
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 557 DDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCFG 703
++GC + PA+ G E+ D + L++ AF+ S +++ C+I C G
Sbjct: 577 ENGCPRYPALVGPVEQDFDKNRLKSDLRAFRLDGSYDVQIVCSIMFCAG 625
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +3
Query: 288 KTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRSGDQVSSAEIGENLVLQVDVQP 467
K G VT + S T T PP + ++I+++ + + A IG+ L+L + +
Sbjct: 489 KEGSVVVTTIYEASSQNTTVLDVATPPPVSAELQILNQLEEPLHKASIGDPLLLVITSEQ 548
Query: 468 SSIYGGFARSCVAKQV 515
+ + C A +V
Sbjct: 549 AGPHNMMVTECTATRV 564
>AC084196-7|AAK29949.2| 284|Caenorhabditis elegans Hypothetical
protein Y55D5A.6 protein.
Length = 284
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 557 DDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
++GC+ D + + S+D S + A AFKFP + +C +R C
Sbjct: 127 ENGCSLDEELISDTTYSQDFSKIYATSLAFKFPEEYEVFIRCAVRTC 173
>Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical
protein F53B6.6 protein.
Length = 610
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 536 NEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVCF 700
N++ + DD GC+ DP + + E + + FK+ + F C +++C+
Sbjct: 259 NKFELVDDRGCSTDPFLLPQIEYEHGAISAYTNAHVFKYADKVQLYFTCTVQLCY 313
>Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical
protein F20D1.8 protein.
Length = 405
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 485 FCTQLRCKTSEVSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSD 664
FC + + V E + D++GCA D + E S D + + + FKF
Sbjct: 229 FCVTVH--SCNVKDETGKEVQIFDENGCAVDKYLINNLEYSSDLTGGQLS-QVFKFADQP 285
Query: 665 NIRFQCNIRV 694
++ FQC IR+
Sbjct: 286 SVFFQCKIRL 295
>Z68120-1|CAA92199.3| 711|Caenorhabditis elegans Hypothetical
protein T24C2.1 protein.
Length = 711
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 518 VSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
+S N + +L+ D++GC D + G+ S+ L A FKF + D R +C + C
Sbjct: 189 LSQNGQIIHLI-DENGCVIDSELMGDIVYSDHVPKLYARARIFKFLTDDKYRIECTLEFC 247
>Z49071-5|CAA88879.1| 609|Caenorhabditis elegans Hypothetical
protein T22C8.7 protein.
Length = 609
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 539 EYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
++ D+ GC D ++F E S+D + A AF++ + F C I C
Sbjct: 211 DFQFIDERGCVTDFSLFPEVSYSDDLKSAFTAVRAFRYADQVMVHFSCQITTC 263
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRS--GDQVSSAEIG 434
KA+ + CIY+ E + NVS + + T + P C ++S S G V A +G
Sbjct: 124 KAYRLNCIYRQQESTLQQRINVSDIPS--TALQSKNAPKCRYDVLSGSLNGPVVRFANVG 181
Query: 435 ENLVLQVDVQPSSIYGGFARSCVAK 509
+ +V+ S +G SCV +
Sbjct: 182 D-VVVHKWTCDSDRFGFVVHSCVVR 205
>AF218866-1|AAF67103.1| 711|Caenorhabditis elegans transmembrane
protein RAM-5 protein.
Length = 711
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 518 VSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
+S N + +L+ D++GC D + G+ S+ L A FKF + D R +C + C
Sbjct: 189 LSQNGQIIHLI-DENGCVIDSELMGDIVYSDHVPKLYARARIFKFLTDDKYRIECTLEFC 247
>Z49125-1|CAA88934.1| 424|Caenorhabditis elegans Hypothetical
protein C47G2.1 protein.
Length = 424
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRII--SRSGDQVSSAEIG 434
+A+ I+C Y ++ V+ VS LTTA P P C I+ SG + A IG
Sbjct: 115 RAYRIQCFYMESDKTVSTQIEVSDLTTAFQ-TQVVPMPVCKYEILDGGPSGQPIQFATIG 173
Query: 435 ENL 443
+ +
Sbjct: 174 QQV 176
>Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 548 VTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
V DD GC DP + S D A + FKF + F C +++C
Sbjct: 218 VIDDKGCPIDPILITGIRYSSDLQRAYAESSVFKFADKPGVWFFCQVQMC 267
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRSGDQVSSAEIGEN 440
+A+H+KC ++ + +T VSM+ T A G P C+ I + D++ + N
Sbjct: 119 QAYHVKCFFEEANKGLTAELGVSMIPTTELEARHG-IPGCTYSIHRSTIDELDAGRPAGN 177
Query: 441 LV 446
++
Sbjct: 178 VI 179
>Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 548 VTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
V DD GC DP + S D A + FKF + F C +++C
Sbjct: 218 VIDDKGCPIDPILITGIRYSSDLQRAYAESSVFKFADKPGVWFFCQVQMC 267
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRSGDQVSSAEIGEN 440
+A+H+KC ++ + +T VSM+ T A G P C+ I + D++ + N
Sbjct: 119 QAYHVKCFFEEANKGLTAELGVSMIPTTELEARHG-IPGCTYSIHRSTIDELDAGRPAGN 177
Query: 441 LV 446
++
Sbjct: 178 VI 179
>Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical
protein F22B5.3 protein.
Length = 389
Score = 34.3 bits (75), Expect = 0.086
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIIS--RSGDQVSSAEIG 434
+A+ ++C Y ++ V+ VS LTTA P P C I++ +G+ V A IG
Sbjct: 116 RAYRVQCFYMEADKTVSTQIEVSDLTTAFQ-TQVVPMPICKYEILNGGPTGEPVQFATIG 174
Query: 435 ENL 443
+ +
Sbjct: 175 QQV 177
>AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical
protein Y55F3C.7b protein.
Length = 502
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 500 RCKTSEVSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQ 679
+C V NV + +TD GCA +I G + R E + F+FP++ ++
Sbjct: 180 QCIAQPVGGNVTVQ--LTDPVGCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKIS 236
Query: 680 CNIRVCFG 703
C + C G
Sbjct: 237 CIVTECDG 244
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 500 RCKTSEVSTNVENEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQ 679
+C V NV + +TD GCA +I G + R E + F+FP++ ++
Sbjct: 180 QCIAQPVGGNVTVQ--LTDPVGCALFKSIMGHFARRESVEEAEIP-SMFRFPNAKQLKIS 236
Query: 680 CNIRVCFG 703
C + C G
Sbjct: 237 CIVTECDG 244
>Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical
protein W06D12.1 protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 548 VTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRV 694
+ D+ GC D I E E +E + FKF + F C IRV
Sbjct: 78 LVDEHGCTLDAFILKELEYNEKELEAGQMSSVFKFADKPTVFFSCMIRV 126
>Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical
protein R07E3.3 protein.
Length = 379
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 554 DDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRV 694
+D GCA D + E D A R A + +K+ DN+ F C I +
Sbjct: 213 NDKGCALDKYLLTNLEYPTDLMAGREA-HVYKYADRDNMYFDCQISI 258
>U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical
protein F10E7.10 protein.
Length = 437
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 536 NEYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
N+ L+ D +GC D + + + S + FKF RF C I++C
Sbjct: 203 NKILIIDQNGCGIDHYVMDTPIYNGEQSIAFQETHVFKFAQRTVTRFICQIKIC 256
>AF067608-2|AAC17653.1| 225|Caenorhabditis elegans Hypothetical
protein B0511.5 protein.
Length = 225
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 548 VTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRV 694
+ D +GC+ D + + R AF+F + F+CN+R+
Sbjct: 164 IIDSEGCSLDTTRLPNLRYENNKLSARVMSKAFRFGDDVAVEFECNVRL 212
>Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical
protein E04D5.3 protein.
Length = 507
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 261 KAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRIISRS-GDQVSSAEIGE 437
+A+ + C Y G + V ++S LTT + + P C I++ + G + A IG+
Sbjct: 123 RAYRVSCFYVEGTKKVHNHVDISALTTQ-LLESETQLPVCRYEILNEAGGSPIKYARIGD 181
Query: 438 NL 443
+
Sbjct: 182 QV 183
>AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical
protein W04C9.3 protein.
Length = 445
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 16 QVECLADGVRVRLKIKD-FNGLLYVKSYSKDERCRKVVXMPKDEESFVFFTVHFGDCGL 189
+++C + + ++ F G +Y++ + + CR+ P FTV GDCG+
Sbjct: 28 KLQCNPESITFSFNTRNPFIGNVYIRGFYRTPGCRRQFLAPNQAGGS--FTVRLGDCGM 84
>Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical
protein M142.2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +3
Query: 255 TTKAFHIKCIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTC--SMRIISRSGDQVSSAE 428
T + ++C Y +++VT+ +VSM+TT P C ++R + G V A
Sbjct: 317 TDQTVKVQCFYMEADKHVTVPLSVSMITTVFR-EQIYQMPQCAYTLRKGAPDGPIVRFAT 375
Query: 429 IGENL-----VLQVDVQPSSIYGGFARSC 500
+GE++ ++V+ +G SC
Sbjct: 376 LGESVYHRWECIEVEGADKDTFGMLVHSC 404
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/50 (22%), Positives = 21/50 (42%)
Frame = +2
Query: 548 VTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
+ D +GC D + + ++ FK+ ++FQC I +C
Sbjct: 416 ILDSNGCGLDAVLLSTPDYDTSLRLATKPYHVFKYADRPVLQFQCQITLC 465
>AF106584-1|AAC78221.1| 360|Caenorhabditis elegans Hypothetical
protein F54A5.2 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +2
Query: 536 NEYLVTDDDGCAKDPA--IFGEWE--RSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
+E ++D GC+ + ++G++E R + A+ FP+S+ + CN+ VC
Sbjct: 203 SELPLSDSHGCSLQTSGEVWGDFEVTRRNGKTIFYNHIKAWAFPTSNEVNIFCNLHVC 260
>Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical
protein C55A1.8 protein.
Length = 337
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -1
Query: 180 ISEMYSEENKTFFV--FRHXYN--FPASLILTVTFYVQKAVEIFNLKSDS 43
++ Y+ EN F + F YN F +S +LTV FYV +A +++ S
Sbjct: 99 VTSFYASENPQFMLKLFMLIYNWAFYSSQLLTVLFYVLRAAVLYSRNQKS 148
>M55997-1|AAA27995.1| 308|Caenorhabditis elegans cuticlin 1
protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +3
Query: 279 CIYKTGEQNVTLAFNVSMLTTAGTIANTGPPPTCSMRII--SRSGDQVSSAEIGENL 443
C Y ++ V+ VS LTTA P P C I+ SG + A IG+ +
Sbjct: 6 CFYMESDKTVSTQIEVSDLTTAFQ-TQVVPMPVCKYEILDGGPSGQPIQFATIGQQV 61
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical protein
T23F1.5 protein.
Length = 1262
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +2
Query: 539 EYLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
++ + D+ GC+ D I + AFK P +++ +C+I +C
Sbjct: 1098 DHTLIDEQGCSADLQIIDHPHYDTYHDTASSHMWAFKVPDMSSLQIKCDILIC 1150
>Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.3b protein.
Length = 713
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 16 QVECLADGVRVRLKIKDFNGLLYVKSYSKDERCRKVVXMPKDEESFVFFTVHFGDCGLVH 195
++ C DGV K+ N + K YSK +R ++ K SF + GD G +
Sbjct: 302 EIRCKIDGV----KVNTINDIPLRKHYSKSKRVGDIIIEGKPGTSFYKSETNLGDHGYDY 357
Query: 196 VN 201
N
Sbjct: 358 HN 359
>Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical
protein C27A7.3a protein.
Length = 743
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +1
Query: 16 QVECLADGVRVRLKIKDFNGLLYVKSYSKDERCRKVVXMPKDEESFVFFTVHFGDCGLVH 195
++ C DGV K+ N + K YSK +R ++ K SF + GD G +
Sbjct: 332 EIRCKIDGV----KVNTINDIPLRKHYSKSKRVGDIIIEGKPGTSFYKSETNLGDHGYDY 387
Query: 196 VN 201
N
Sbjct: 388 HN 389
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +3
Query: 393 ISRSGDQVSSAEIGENLVLQVDVQPSSIYGGFARSCVAKQVKYQLT*KMSIL*QTMTVVL 572
+ RSG+ S + + L ++D +P+ I GGF+ ++K + L + +L Q + + +
Sbjct: 249 VLRSGEPESPKWLAQLLNTKIDDRPTLISGGFSVQRISKSEAHYLGMRNYLLCQQIIMSI 308
Query: 573 RTPLFSVNGNEARTAAR 623
+ N+A + R
Sbjct: 309 HLYQQKMKSNDAAPSLR 325
>U97012-9|AAK39142.2| 995|Caenorhabditis elegans Hypothetical
protein C04E6.11 protein.
Length = 995
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 421 ELTWSPEREIILMEQVGGGPVLAIVPAVVNMDTLNARVTFCSPVLY 284
E+ W P +E+ ME+ G P + AVV + + V C ++Y
Sbjct: 168 EVDWDPLKELDNMERSGVEPTIETFHAVVKRISASGDVDGCKNMVY 213
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 ENEYLVTDDDGCAKDPA-IFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
E+E L DGC D + SE G+ + + AF++ ++ +++ C +R+C
Sbjct: 655 EHEPLFIIRDGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRIC 708
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 ENEYLVTDDDGCAKDPA-IFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
E+E L DGC D + SE G+ + + AF++ ++ +++ C +R+C
Sbjct: 496 EHEPLFIIRDGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRIC 549
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 ENEYLVTDDDGCAKDPA-IFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCNIRVC 697
E+E L DGC D + SE G+ + + AF++ ++ +++ C +R+C
Sbjct: 536 EHEPLFIIRDGCPADGVGLVCPPTHSEFGA--KVSVEAFRYQTTGQVQYSCLVRIC 589
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +2
Query: 542 YLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCN 685
Y + + C DP++ W R S+L F P + + QC+
Sbjct: 1003 YNHSQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCD 1050
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +2
Query: 542 YLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCN 685
Y + + C DP++ W R S+L F P + + QC+
Sbjct: 1006 YNHSQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCD 1053
>U39994-1|AAB37019.1| 326|Caenorhabditis elegans Hypothetical
protein C48C5.3 protein.
Length = 326
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/67 (20%), Positives = 36/67 (53%)
Frame = +1
Query: 82 YVKSYSKDERCRKVVXMPKDEESFVFFTVHFGDCGLVHVNGLASFVLVMQTHLKLVTSPQ 261
Y++ ++ ++ CR+++ +P ++ FTV + G+A ++L + T + S +
Sbjct: 165 YLECFTCEDDCRQLMILPNKVVMYIVFTVSACIAPSLTSLGVAIYILNVVTSHRTKLSDE 224
Query: 262 KHSTSNA 282
++S+A
Sbjct: 225 NGNSSHA 231
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +2
Query: 542 YLVTDDDGCAKDPAIFGEWERSEDGSALRAAFNAFKFPSSDNIRFQCN 685
Y + + C DP++ W R S+L F P + + QC+
Sbjct: 1003 YNHSQEQACEDDPSVAETWSRHFAPSSLEHCIEKFSCPETLDAAIQCD 1050
>AF024494-10|AAB70336.1| 642|Caenorhabditis elegans Hypothetical
protein C38C3.7 protein.
Length = 642
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 157 FFTVHFGDCGLVHVNGLASFVLVMQTHLKLVTSPQKHSTSNAYTKLV 297
F T H D + L F+ + + KLV SP++ S + Y KLV
Sbjct: 507 FLTAHEIDISSRTFSKLEEFISMFHSVHKLVYSPKQGSNDDKYEKLV 553
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 641 AFKFPSSDNIRFQCNIRVCFG 703
AF+F SS +IR C + +C G
Sbjct: 923 AFRFDSSASIRVTCEVEICKG 943
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 641 AFKFPSSDNIRFQCNIRVCFG 703
AF+F SS +IR C + +C G
Sbjct: 919 AFRFDSSASIRVTCEVEICKG 939
>U80838-3|AAC71113.1| 453|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform c protein.
Length = 453
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Frame = +1
Query: 151 FVFFTVHFGDCGLVHVN-------GLASFVLVMQTHLKLVTSPQKHSTSNAYTKLVN 300
F F T H C L H++ GL L+ ++ L V SP H A+ L N
Sbjct: 167 FTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHN 223
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Frame = +1
Query: 151 FVFFTVHFGDCGLVHVN-------GLASFVLVMQTHLKLVTSPQKHSTSNAYTKLVN 300
F F T H C L H++ GL L+ ++ L V SP H A+ L N
Sbjct: 167 FTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHN 223
>AF183400-1|AAF13188.1| 453|Caenorhabditis elegans LIN-42 protein.
Length = 453
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Frame = +1
Query: 151 FVFFTVHFGDCGLVHVN-------GLASFVLVMQTHLKLVTSPQKHSTSNAYTKLVN 300
F F T H C L H++ GL L+ ++ L V SP H A+ L N
Sbjct: 167 FTFITKHSSTCALTHIDYASIPYLGLLPTDLIGKSLLAFVYSPDVHVVRQAHIDLHN 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,860,940
Number of Sequences: 27780
Number of extensions: 333937
Number of successful extensions: 912
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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