Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30266
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical pr...    94   7e-20
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    34   0.11 
AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like ...    34   0.11 
Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U42436-7|AAO61428.2|  223|Caenorhabditis elegans Hypothetical pr...    33   0.25 
Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine r...    28   5.4  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    27   9.4  

>Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical
           protein W08E3.1 protein.
          Length = 160

 Score = 94.3 bits (224), Expect = 7e-20
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +1

Query: 88  MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSK-NRKLQ 264
           MTI KNNKM  H+NYR+++ILQD RTFIG FKAFDKHMN++L +CEE R+IK K  +K  
Sbjct: 1   MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTD 60

Query: 265 TEKKKELWVLFFYVEKI 315
            E+K+ L ++    E I
Sbjct: 61  GEEKRILGLVLVRGEHI 77



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +3

Query: 255 KTADREEKRTLGFVLLRGENIVSLTI 332
           K  D EEKR LG VL+RGE+IVS+T+
Sbjct: 57  KKTDGEEKRILGLVLVRGEHIVSMTV 82


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +1

Query: 124 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 228
           ++ RV V +++ R   G  +AFD+H+N++L + EE
Sbjct: 25  LDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEE 59


>AC084197-12|AAL00875.1|   98|Caenorhabditis elegans Lsm sm-like
           protein protein 8 protein.
          Length = 98

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 112 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 228
           +  ++N  V V+  D R  +G  K FD+ +NL++ D  E
Sbjct: 5   LDAYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHE 43


>Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical
           protein ZK593.7 protein.
          Length = 104

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 112 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEF 231
           + + ++  +RV  Q  R   G  + FD+ +N++L DC E+
Sbjct: 16  LTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREY 55


>U42436-7|AAO61428.2|  223|Caenorhabditis elegans Hypothetical
           protein C49H3.4 protein.
          Length = 223

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +1

Query: 115 QQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNRKLQTEKKK 279
           Q+ I  RVR  ++  R F G    FD+H NL++ D  E      K +K  T +K+
Sbjct: 120 QKRIEVRVRSAIRIDRIFEGIPTTFDEHFNLMMKDVTETVLHGRKAQKEFTNRKE 174


>Z81071-3|CAB03013.1|   91|Caenorhabditis elegans Hypothetical
           protein F28F8.3 protein.
          Length = 91

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 124 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFRKIKSKNR--KLQT 267
           I  ++ VI+++ +  +GT   FD ++N++L D  E+       R  KL T
Sbjct: 22  IGSKIWVIMKNDKEIVGTLTGFDDYVNMVLEDVVEYENTADGKRMTKLDT 71


>Z78012-3|CAB01413.1|  118|Caenorhabditis elegans Hypothetical
           protein C52E4.3 protein.
          Length = 118

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 11/34 (32%), Positives = 24/34 (70%)
 Frame = +1

Query: 127 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 228
           N++V +  ++++  +G  KAFD+H N++L + +E
Sbjct: 39  NHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 181 KAFDKHMNLILGDCEEFRKIKSKNRKLQTEKKKE 282
           K  +KH    + D E +   K  NRK++TEKKK+
Sbjct: 129 KVSEKHYLKKIADREFWCAEKDNNRKVETEKKKK 162


>AF038608-14|AAT92087.1|  314|Caenorhabditis elegans Serpentine
           receptor, class z protein83 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 18/43 (41%), Positives = 28/43 (65%)
 Frame = -2

Query: 132 IINMLLHLIVFADRHFIGVIRKILLDIWKASICFSDIHLTVAF 4
           I++ LLH+I     H I +IR +++ I+ A +CF+  HLT AF
Sbjct: 79  ILHTLLHVI-----HEIVIIRFLIVVIFYA-LCFTMYHLTKAF 115


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 558  WVASSRNDGSSSWHGSLWAR 617
            +VA+ RN  SSS+ G+LWAR
Sbjct: 2249 FVAAFRNPESSSFGGALWAR 2268


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 682 NINHKSLHCT*TNSVAFLEDPVLAHNDPCQEELPS-FLEEATHHG 551
           N+N K       + + F++DP+ +H D C EE P  +  E T+ G
Sbjct: 127 NLNEKDKSTRIIDYMDFVKDPISSH-DYCAEEDPKLYRSETTNRG 170


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 682 NINHKSLHCT*TNSVAFLEDPVLAHNDPCQEELPS-FLEEATHHG 551
           N+N K       + + F++DP+ +H D C EE P  +  E T+ G
Sbjct: 127 NLNEKDKSTRIIDYMDFVKDPISSH-DYCAEEDPKLYRSETTNRG 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,115,192
Number of Sequences: 27780
Number of extensions: 196471
Number of successful extensions: 561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)