Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30265X
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   2.5  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   4.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   4.4  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   5.8  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   5.8  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    23   5.8  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    23   5.8  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 486 PAGGAAEGHRRVRELPHR 433
           P  GAAE HRR R  P R
Sbjct: 325 PVPGAAERHRRRRPPPRR 342


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +2

Query: 356 ARGTPRSRGCSPARTAPRWGAGGTACRCGSSRTRRCPSAAPPAGSK 493
           A G P   G  P+R +     G  +   G+SR  + P A PP   K
Sbjct: 178 ASGVP---GAEPSRGSTPPTPGDDSDSMGASRHGKTPLATPPTKEK 220


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 359 RGTPRSRGCSPARTAPRWGAGGTACRCGSSRTRRCPSAAP 478
           R  P SR  +P R +PR G    +CR   +R RR  S  P
Sbjct: 248 RKIPPSRR-NPRRRSPRSGGRWPSCRSPPAR-RRSRSTRP 285


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 336 LARRHGELVVHHVVGAAAQP--EQRRGGVQVA 425
           L  R G+L +    GAAA+P  ++R   VQ++
Sbjct: 693 LVTRRGDLTIEIGTGAAARPRVDERLDAVQLS 724


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 336 LARRHGELVVHHVVGAAAQP--EQRRGGVQVA 425
           L  R G+L +    GAAA+P  ++R   VQ++
Sbjct: 737 LVTRRGDLTIEIGTGAAARPRVDERLDAVQLS 768


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 262 SLTEKNMGPSSASQRASTAVTQCMYSRAVMVSS 360
           S+ E+++G      R S  V QC   +  +VSS
Sbjct: 72  SVNERSLGIKQRIDRLSAKVDQCDPKQVTVVSS 104


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 262 SLTEKNMGPSSASQRASTAVTQCMYSRAVMVSS 360
           S+ E+++G      R S  V QC   +  +VSS
Sbjct: 72  SVNERSLGIKQRIDRLSAKVDQCDPKQVTVVSS 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,469
Number of Sequences: 2352
Number of extensions: 7711
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)