Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30264
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0042 + 473912-474058,474208-474349,474442-476264 138 5e-33
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 138 6e-33
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 137 8e-33
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 137 8e-33
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 98 8e-21
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 97 1e-20
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 95 4e-20
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 87 2e-17
06_03_0788 - 24603849-24603949,24604030-24604123,24604206-246044... 31 1.4
08_02_0846 - 21811156-21811833,21811960-21812055,21812157-218122... 30 1.9
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 29 3.3
06_01_0671 - 4899611-4899829,4900870-4901448 29 4.3
12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009 28 7.6
04_04_0699 - 27345243-27346199 28 7.6
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 28 10.0
05_04_0230 + 19250513-19250633,19250681-19251165 28 10.0
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 138 bits (334), Expect = 5e-33
Identities = 64/85 (75%), Positives = 77/85 (90%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
R+ESLTD SKLD+ EL+I+++P K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FM
Sbjct: 55 RFESLTDKSKLDAQPELFIRLVPYKPSKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFM 114
Query: 435 EALQAGADISMIGQFGVGFYSSYLV 509
EALQAGAD+SMIGQFGVGFYS+YLV
Sbjct: 115 EALQAGADVSMIGQFGVGFYSAYLV 139
Score = 94.3 bits (224), Expect = 1e-19
Identities = 48/88 (54%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXX 679
L A++V V +KHNDDEQYVWES AGGSFTV D +GE LGRGTKI L +K+D E++
Sbjct: 138 LVAEKVVVTTKHNDDEQYVWESQAGGSFTVTLDTAGERLGRGTKITLFLKDDQLEYLEER 197
Query: 680 XXXXXXXXXSQFIGYPIKLMVEKEREKD 763
S+FI YPI L EK EK+
Sbjct: 198 RLKDLVKKHSEFISYPIYLWSEKTTEKE 225
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = +1
Query: 109 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+ Q AE ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI
Sbjct: 6 DVQMAEKETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKI 54
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 138 bits (333), Expect = 6e-33
Identities = 65/85 (76%), Positives = 76/85 (89%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
R+ESLTD SKLD+ EL+I I+P+K TL+IID+GIGMTK+DLVNNLGTIA+SGTK FM
Sbjct: 48 RFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFM 107
Query: 435 EALQAGADISMIGQFGVGFYSSYLV 509
EAL AGAD+SMIGQFGVGFYS+YLV
Sbjct: 108 EALAAGADVSMIGQFGVGFYSAYLV 132
Score = 100 bits (239), Expect = 2e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXX 679
L A+RV V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 131 LVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEER 190
Query: 680 XXXXXXXXXSQFIGYPIKLMVEKEREKD 763
S+FI YPI L EK EK+
Sbjct: 191 RLKDLIKKHSEFISYPISLWTEKTTEKE 218
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +1
Query: 121 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKI 47
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 137 bits (332), Expect = 8e-33
Identities = 64/85 (75%), Positives = 76/85 (89%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
R+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FM
Sbjct: 48 RFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFM 107
Query: 435 EALQAGADISMIGQFGVGFYSSYLV 509
EAL AGAD+SMIGQFGVGFYS+YLV
Sbjct: 108 EALAAGADVSMIGQFGVGFYSAYLV 132
Score = 100 bits (239), Expect = 2e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXX 679
L A+RV V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 131 LVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEER 190
Query: 680 XXXXXXXXXSQFIGYPIKLMVEKEREKD 763
S+FI YPI L EK EK+
Sbjct: 191 RLKDLVKKHSEFISYPISLWTEKTTEKE 218
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +1
Query: 121 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKI 47
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 137 bits (332), Expect = 8e-33
Identities = 64/85 (75%), Positives = 76/85 (89%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
R+ESLTD SKLD+ EL+I I+P+K TL+IID+G+GMTK+DLVNNLGTIA+SGTK FM
Sbjct: 48 RFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFM 107
Query: 435 EALQAGADISMIGQFGVGFYSSYLV 509
EAL AGAD+SMIGQFGVGFYS+YLV
Sbjct: 108 EALAAGADVSMIGQFGVGFYSAYLV 132
Score = 100 bits (239), Expect = 2e-21
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXX 679
L A+RV V +KHNDDEQYVWES AGGSFTV D SGE LGRGTKI L++K+D E++
Sbjct: 131 LVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEER 190
Query: 680 XXXXXXXXXSQFIGYPIKLMVEKEREKD 763
S+FI YPI L EK EK+
Sbjct: 191 RLKDLVKKHSEFISYPISLWTEKTTEKE 218
Score = 83.8 bits (198), Expect = 1e-16
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +1
Query: 121 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKI
Sbjct: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKI 47
>12_02_0522 -
19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 97.9 bits (233), Expect = 8e-21
Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
RY S+TDP + G L I+I +K G +TI DTGIGMT+ +LV++LGTIA SGT F+
Sbjct: 395 RYLSVTDPDLIKDGAGLDIRIQTDKENGIITITDTGIGMTRQELVDSLGTIASSGTAKFL 454
Query: 435 EAL----QAGADISMIGQFGVGFYSSYLV 509
+AL +AG D ++IGQFGVGFYS++LV
Sbjct: 455 KALKESQEAGVDSNLIGQFGVGFYSAFLV 483
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +1
Query: 100 EEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+ +T P VE +QAE+ +LM LI+++ YSNKE+FLREL+SN+SDALDK+
Sbjct: 345 DSSDTPP--VEKHEYQAEVNRLMDLIVHSLYSNKEVFLRELVSNASDALDKL 394
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +2
Query: 503 LGADRVTVHSKH-NDDEQYVWESSA-GGSFTVRP--DSGEPLGRGTKIVLHVKEDLAEFM 670
L +D+V V +K D+QYVWE A S+T+R D + L RGT++ L++K + F
Sbjct: 482 LVSDKVAVSTKSPKSDKQYVWEGEAESSSYTIREETDPEKLLPRGTRLTLYLKREDKGFA 541
Query: 671 XXXXXXXXXXXXSQFIGYPIKLMVEKEREKD 763
SQF+ +PI EK K+
Sbjct: 542 HPEKIQKLVKNYSQFVSFPIYTWQEKGYTKE 572
>06_03_1404 -
29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 97.5 bits (232), Expect = 1e-20
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 RYESLTDPSKLDSGK--ELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKA 428
R+ +LTD L G +L I+I +K + L+I D GIGMTK DL+ NLGTIAKSGT A
Sbjct: 147 RFLALTDKEVLGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSA 206
Query: 429 FMEALQAGADISMIGQFGVGFYSSYLV 509
F+E +Q G D+++IGQFGVGFYS YLV
Sbjct: 207 FVEKMQTGGDLNLIGQFGVGFYSVYLV 233
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHVKEDLAEFMXXX 679
L AD V V SKHNDD+Q+VWES A GSF + D+ EPLGRGT+I LH++++ E++
Sbjct: 232 LVADYVEVISKHNDDKQHVWESKADGSFAISEDTWNEPLGRGTEIRLHLRDEAKEYVEED 291
Query: 680 XXXXXXXXXSQFIGYPIKLMVEKE 751
S+FI +PI L KE
Sbjct: 292 KLKDLVKKYSEFINFPIYLWATKE 315
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = +1
Query: 109 ETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+T + E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKI
Sbjct: 98 KTLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKI 146
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 95.5 bits (227), Expect = 4e-20
Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
R+ +TD S L G EL I+I P+ + GT+TI DTGIGMTK +L + LGTIA+SGT F+
Sbjct: 384 RFLGVTDSSLLADGGELEIRIKPDPDAGTITITDTGIGMTKDELKDCLGTIAQSGTSKFL 443
Query: 435 EALQ----AGADISMIGQFGVGFYSSYLV 509
+AL+ GAD +IGQFGVGFYS++LV
Sbjct: 444 KALKENKDLGADNGLIGQFGVGFYSAFLV 472
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/51 (56%), Positives = 42/51 (82%)
Frame = +1
Query: 103 EMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
E + AE E F +QAE+++LM LI+++ YS+KE+FLREL+SN+SDALDK+
Sbjct: 333 EKAEETAEEEKFEYQAEVSRLMDLIVHSLYSHKEVFLRELVSNASDALDKL 383
Score = 45.6 bits (103), Expect = 5e-05
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 503 LGADRVTVHSKH-NDDEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAEF 667
L A++V V +K D+QYVWE A S V + +P L RGT+I L ++ +D EF
Sbjct: 471 LVAEKVVVSTKSPKSDKQYVWEGVADSSSYVIKEETDPEKMLTRGTQITLVLRPDDKFEF 530
Query: 668 MXXXXXXXXXXXXSQFIGYPIKLMVEKER 754
SQF+ +PI EK R
Sbjct: 531 ADPGRIQGLVKNYSQFVSFPIYTWQEKSR 559
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 86.6 bits (205), Expect = 2e-17
Identities = 51/98 (52%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTII---------DTGIGMTKADLVNNLGTI 407
R+ S+TD S L G EL I+I P+ GT+TI DTGIGMTK +L + LGTI
Sbjct: 125 RFLSVTDSSVLSDGGELEIRIKPDPEAGTITITRSHCFASYSDTGIGMTKDELKDCLGTI 184
Query: 408 AKSGTKAFMEALQ----AGADISMIGQFGVGFYSSYLV 509
A+SGT F++AL+ GAD +IGQFGVGFYS++LV
Sbjct: 185 AQSGTSKFLKALKENKDLGADNGLIGQFGVGFYSAFLV 222
Score = 62.5 bits (145), Expect = 4e-10
Identities = 26/47 (55%), Positives = 40/47 (85%)
Frame = +1
Query: 115 QPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
+ A E F +QAE+++L+ LI+++ YS+KE+FLREL+SN+SDALDK+
Sbjct: 78 EEAAGEQFEYQAEVSRLLDLIVHSLYSHKEVFLRELVSNASDALDKL 124
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 503 LGADRVTVHSKH-NDDEQYVWESSAGGSFTVRPDSGEP---LGRGTKIVLHVK-EDLAEF 667
L A++V V +K D+QYVWE+ A S V + +P L RGT+I L ++ +D EF
Sbjct: 221 LVAEKVVVSTKSPKADKQYVWEAMADSSSYVIKEETDPEKMLTRGTQITLFLRDDDKYEF 280
Query: 668 MXXXXXXXXXXXXSQFIGYPIKLMVEKER 754
SQF+ +PI EK R
Sbjct: 281 ADPGRIQGLVKNYSQFVSFPIYTWQEKSR 309
>06_03_0788 -
24603849-24603949,24604030-24604123,24604206-24604413,
24604727-24604839,24605679-24605816,24605916-24605999,
24606517-24606675,24606754-24606837,24607505-24607840,
24607941-24608042,24608970-24609153,24609699-24610044,
24610444-24610591,24611053-24611203,24611786-24611867,
24612314-24612362
Length = 792
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +3
Query: 273 DPSKLD-SGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 449
D S+L+ S K L+ K +K L++ID G GMT A+++ + K K +
Sbjct: 256 DASRLNISVKSLFSKKA-DKKIPVLSVIDDGHGMTCAEMMRMISFGHKRPDKQRQD---- 310
Query: 450 GADISMIGQFGVGFYSSYLVLTA*LFTLNTMTTSNTCGNLLQEARSQSAQTAVSPLVEVQ 629
IG+FG+GF + + L L T T+S+ L ++ +++ P+V +
Sbjct: 311 -----QIGRFGIGFKTGAMKLGRDAIVL-TQTSSSRSVAFLSQSFNENKDNLEIPVVTYR 364
Query: 630 R 632
+
Sbjct: 365 K 365
>08_02_0846 -
21811156-21811833,21811960-21812055,21812157-21812267,
21812367-21812743,21814699-21814734,21815236-21815839
Length = 633
Score = 30.3 bits (65), Expect = 1.9
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Frame = +3
Query: 351 IDTGIGMTKADLVNNLGT----IAKSGTKAFMEALQAG-ADISMIGQFGVGFYSSYL--V 509
++ GM+ A+L+ + I +SGTK E L+AG + ++G+ GVG + L
Sbjct: 100 VECAYGMSPAELLAKVAQFDALIVRSGTKVTREVLEAGRGRLRVVGRAGVGIDNVDLQAA 159
Query: 510 LTA*LFTLNTMTTSNTC----GNLLQEARSQSAQTAVSPLVEVQRSSFTSKRTWQNSWKN 677
A +N T + G L + +++ A + L V + T T Q W+
Sbjct: 160 TEAGCLVVNAPTANTVAAAEHGIALLASMARNVSQADAALKAVYSRTLT-VFTAQGKWQR 218
Query: 678 TK 683
TK
Sbjct: 219 TK 220
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 299 RAVHQDHSQQERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQH 466
RA + + H +DHR+R+ G G+H +HGG R RH H
Sbjct: 525 RARRRHQKGRHHRHHHDHRHRH-------GHSHGDHHH----HYHGGHHQRRRHHH 569
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 440 SSSRCRHQHDWTVRCWLLLQLLGADRVTVHSKHNDDEQ-YVWESSAGGSFTVRPDSG 607
SS R R WLLLQ L V +DD V + SA +FT+R G
Sbjct: 78 SSCRSRRSTMMHAAAWLLLQQLSPAAARVARAADDDSSVQVSKGSAAPNFTLRDQDG 134
>12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009
Length = 754
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +3
Query: 225 FQFIGRFRQNRYESLTDPSKLDSGKELYIK 314
++F+ FRQN+++++ DP +D + I+
Sbjct: 647 YRFLSMFRQNKHQAMLDPEIVDGSNVVAIE 676
>04_04_0699 - 27345243-27346199
Length = 318
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -3
Query: 576 PAEDSHTYCSSSLCLE*TVTRSAPSNWSRSQHRTVQSC*CRHL--LEEPP*KL*YQISRW 403
PA ++ SSS C T + S S+ S + + ++ L PP +L + + W
Sbjct: 238 PATSESSFSSSSSCTTTTTSSSTSSSGSPKRRKRGEAAAASMSMPLVPPPSQLNWPVQAW 297
Query: 402 FPNCSP 385
+P +P
Sbjct: 298 YPAAAP 303
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 569 SAGGSFTVRPDSGEPLGRGTK 631
SA G+ RP + PLGRGT+
Sbjct: 19 SAAGAVVGRPSTARPLGRGTR 39
>05_04_0230 + 19250513-19250633,19250681-19251165
Length = 201
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 616 WSRYKDRPSRQRGLGRIHGRTQNQRDR 696
W R + RP+ G G GR Q +RDR
Sbjct: 163 WRRERGRPAAGAGSGGSGGRWQRERDR 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,840,757
Number of Sequences: 37544
Number of extensions: 512842
Number of successful extensions: 1263
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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