Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30264
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    29   0.13 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   2.1  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   2.1  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   3.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   6.3  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   6.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.3  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   8.3  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 419 TRFRDGSQIVHQIGLGHTNTGIDDRKSALVLVG 321
           T+ R+GS I HQ      N  + DR+ +L+L G
Sbjct: 55  TQNRNGSPINHQGNAASANVAVADRQQSLILAG 87


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 FTVRPDSGEPLGRGTKIVL 640
           FT+ PDSGE L  G  I+L
Sbjct: 236 FTLPPDSGEKLSLGVTILL 254


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 FTVRPDSGEPLGRGTKIVL 640
           FT+ PDSGE L  G  I+L
Sbjct: 268 FTLPPDSGEKLSLGVTILL 286


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 584 FTVRPDSGEPLGRGTKIVL 640
           FT+ PDSGE L  G  I+L
Sbjct: 253 FTLPPDSGEKLTLGVTILL 271


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 558  CGNLLQEARSQSAQTAVSPLVEVQR--SSFTSKRTWQNSWKNTKSKR 692
            C  L +++++     A     E  +  S   S R WQN W N+ + R
Sbjct: 876  CITLEEDSKNFRKSRAGESFTETAKKASRQASMRQWQNEWSNSLNGR 922


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 114  CLHFFRHFLYCFLFNSHKMTRGFLTHVFQS 25
            C   F HF Y F F+S      F   +F S
Sbjct: 945  CFRLFNHFYYLFDFDS--SLNSFRNRIFSS 972


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +2

Query: 473 TVRCWLLLQLLGA 511
           T R WLLL LLGA
Sbjct: 3   TYRAWLLLALLGA 15


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
 Frame = +2

Query: 479 RCWLLLQLLGADRVTVHSKHN------DDEQYVWESSAGGSFTVRPDSGEPLGRGTK 631
           R  L+ + +G     VH ++N      DD  Y W     G   VR   G  L R  K
Sbjct: 44  RALLIYERMGGSWSEVHKRNNFFAVSNDDASYPWAVYDDGLLAVRKVKGFVLYRWNK 100


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 314 DHSQQERGHSYDHRYRYWYDQGRFGEQF 397
           D  +QE G ++DH   +W     F   F
Sbjct: 34  DEQKQELGLNFDHDGEFWMSYRDFTRYF 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,163
Number of Sequences: 2352
Number of extensions: 19404
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)