Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30264
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 80 2e-15
U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 80 2e-15
AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 80 2e-15
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 1.3
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 1.3
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 1.6
U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical p... 30 2.2
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 155 bits (376), Expect = 3e-38
Identities = 73/85 (85%), Positives = 82/85 (96%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
RY++LT+PS+LD+GKEL+IKI PNK E TLTI+DTGIGMTKADLVNNLGTIAKSGTKAFM
Sbjct: 48 RYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFM 107
Query: 435 EALQAGADISMIGQFGVGFYSSYLV 509
EALQAGADISMIGQFGVGFYS++LV
Sbjct: 108 EALQAGADISMIGQFGVGFYSAFLV 132
Score = 107 bits (256), Expect = 1e-23
Identities = 51/87 (58%), Positives = 62/87 (71%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPDSGEPLGRGTKIVLHVKEDLAEFMXXXX 682
L AD+V V SK+NDD+ Y WESSAGGSF VRP + + RGTKIV+H+KED +F+
Sbjct: 131 LVADKVVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTRGTKIVMHIKEDQIDFLEERK 190
Query: 683 XXXXXXXXSQFIGYPIKLMVEKEREKD 763
SQFIGYPIKL+VEKEREK+
Sbjct: 191 IKEIVKKHSQFIGYPIKLVVEKEREKE 217
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 130 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SDALDKI
Sbjct: 6 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKI 47
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 RYESLTDPSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFM 434
R SLTDP +L +E+ +KI ++ L I DTG+GMT+ DL+NNLGTIA+SGT F+
Sbjct: 104 RLLSLTDPEQLRETEEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFL 163
Query: 435 EALQAGADIS-----MIGQFGVGFYSSYLV 509
L A S +IGQFGVGFY+++LV
Sbjct: 164 SKLMDTATSSDQQQDLIGQFGVGFYAAFLV 193
Score = 68.5 bits (160), Expect = 5e-12
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +2
Query: 503 LGADRVTVHSKHNDDEQYVWESSAGGSFTVRPD-SGEPLGRGTKIVLHVKEDLAEFMXXX 679
L ADRV V +K+NDD+QY+WES + SFT+ D G L RGT+I L++KE+ A+F+
Sbjct: 192 LVADRVVVTTKNNDDDQYIWESDS-ASFTISKDPRGNTLKRGTQITLYLKEEAADFLEPD 250
Query: 680 XXXXXXXXXSQFIGYPIKLMVEK 748
SQFI + I L K
Sbjct: 251 TLKNLVHKYSQFINFDIFLWQSK 273
Score = 64.5 bits (150), Expect = 8e-11
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +1
Query: 121 AEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKI 255
++ E FQAE+ ++M LIIN+ Y NKEIFLRELISN+SDALDKI
Sbjct: 59 SKAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKI 103
>U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical
protein R151.7a protein.
Length = 672
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3
Query: 309 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 488
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 489 FYSSYLVLTA*LFTLNTMTTSNTCG 563
FYS+++V + + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 94 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK 252
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
>U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical
protein R151.7b protein.
Length = 479
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3
Query: 309 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 488
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 489 FYSSYLVLTA*LFTLNTMTTSNTCG 563
FYS+++V + + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 94 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK 252
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
>AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock
protein 75 protein.
Length = 222
Score = 79.8 bits (188), Expect = 2e-15
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3
Query: 309 IKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 488
I+I NK++ T+T DTGIGM + DLV LGTIAKSG+K F+E + A+ ++IGQFGVG
Sbjct: 100 IRITTNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKENAE-AVIGQFGVG 158
Query: 489 FYSSYLVLTA*LFTLNTMTTSNTCG 563
FYS+++V + + T + +S+ G
Sbjct: 159 FYSAFMVADSVVVTTRKVGSSDADG 183
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 94 MPEEMETQPAEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK 252
+P + +E + FQAE LM ++ + YS+ E+F+RELISN+SDAL+K
Sbjct: 31 VPTQRRWMASEPQRHEFQAETRNLMDIVAKSLYSHSEVFVRELISNASDALEK 83
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 308 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 469
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 376 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 423
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +2
Query: 308 HQDHSQQERGHSYDHRYRYWYDQGR-FGEQFGNHREIWY*SFHGGSSSRCRHQHD 469
H DH GHS+DH +D G G NH S GS + H HD
Sbjct: 394 HDDHGHDSHGHSHDHNE---HDHGHSHGGNNDNHGH----SHSAGSDNHHGHSHD 441
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect(2) = 1.6
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +2
Query: 329 ERGHSYDHRYRYWYDQGRFGEQFGNHREIWY*SFHGGSSSRCRHQHD 469
+ GH++DH + + +D G + G+ + HG + H H+
Sbjct: 77 DHGHAHDHDHGHAHDHGHAHDHHGHSHDEEEDHHHGHAHDHHGHSHE 123
Score = 20.6 bits (41), Expect(2) = 1.6
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +2
Query: 296 QRAVHQDHSQQERGHSYDH 352
Q HQ H GH + H
Sbjct: 36 QNVHHQGHGHAHGGHGHAH 54
>U39999-12|AAA81110.1| 577|Caenorhabditis elegans Hypothetical
protein F41G3.3 protein.
Length = 577
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 323 QQERGHSYDHRYRYWYDQGRFGEQFGN 403
+Q+ H YD RY YD + E +GN
Sbjct: 48 KQQEAHHYDDRYNNTYDNYDYEEDYGN 74
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 440 SLHESFSTRFRDGSQIVHQIGLGHTNTGIDDRKSALVL 327
SLH + R R+ + V +GLG + DDRK+ V+
Sbjct: 155 SLHFKYEQRLREELRNVEYVGLGCYSWNKDDRKNEQVV 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,349,096
Number of Sequences: 27780
Number of extensions: 424756
Number of successful extensions: 1229
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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