Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30263
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   3.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 167 KTVRSCLLYHSQCSSIVRGERLFALGDYRYAKEAFFCHQEEEGNLQ 304
           K V  C L  S   + + G R  ALG    AK      +E + ++Q
Sbjct: 496 KVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLHMQ 541


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 167 KTVRSCLLYHSQCSSIVRGERLFALGDYRYAKEAFFCHQEEEGNLQ 304
           K V  C L  S   + + G R  ALG    AK      +E + ++Q
Sbjct: 388 KVVAECTLKESAAINQILGRRWHALGREEQAKYYELARRERQLHMQ 433


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 212 IVRGERLFALGDYRYAKEAFFCHQEEE 292
           +V+ ERL +LG    A E  +C Q EE
Sbjct: 562 LVQRERLISLGINSDALEPEWCWQNEE 588


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 434 PWYQPSFTEVRKVLQLFRLRQINNG 508
           P  QP+    R   +  R++Q+NNG
Sbjct: 80  PQQQPASVARRNARERNRVKQVNNG 104


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 245 LLVRRASLLLRCLSTDCGTAG 183
           LLV   SL+  CL T+C   G
Sbjct: 10  LLVLSESLVSGCLITNCPRGG 30


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 176 RSCLLYHSQCSSIVRGERLFALG 244
           R C L+H     + R   +F LG
Sbjct: 577 RICTLHHHLSKLVTRFNEIFGLG 599


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,149
Number of Sequences: 336
Number of extensions: 2379
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)