Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30262
(399 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 171 3e-42
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 148 3e-35
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 146 1e-34
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 134 5e-31
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 101 5e-21
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 95 6e-19
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 91 1e-17
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 88 7e-17
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 81 1e-14
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 80 2e-14
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 77 1e-13
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 76 3e-13
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 75 4e-13
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 66 3e-10
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 38 0.096
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 36 0.22
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 1.6
UniRef50_UPI00006A0A65 Cluster: platelet endothelial aggregation... 32 3.6
UniRef50_Q0D6Y0 Cluster: Os07g0420000 protein; n=3; Oryza sativa... 32 3.6
UniRef50_Q0C2V7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.3
UniRef50_A4ADT7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.3
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 31 6.3
UniRef50_A2SCV2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_A2YKM3 Cluster: Putative uncharacterized protein; n=2; ... 31 8.3
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 171 bits (417), Expect = 3e-42
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI
Sbjct: 92 IVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
WLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 152 WLLCTGAREAAFRNIKTIAECLADE 176
Score = 58.0 bits (134), Expect = 6e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 148 bits (359), Expect = 3e-35
Identities = 70/79 (88%), Positives = 75/79 (94%)
Frame = +1
Query: 19 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 198
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTG 233
Query: 199 AREAAFRNIKTIAECVADD 255
AREAAFRNIKTIAEC+AD+
Sbjct: 234 AREAAFRNIKTIAECLADE 252
Score = 58.0 bits (134), Expect = 6e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 253 LINAAKGSSNSYAIKKKDELERVAKSNR 280
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 146 bits (355), Expect = 1e-34
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
I+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI
Sbjct: 85 IIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI 144
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
+LL TGAREAAFRNIK+IAEC+AD+
Sbjct: 145 YLLTTGAREAAFRNIKSIAECLADE 169
Score = 56.0 bits (129), Expect = 3e-07
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 170 LINAAKGSSNSYAIKKKDEIERVAKANR 197
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 134 bits (325), Expect = 5e-31
Identities = 65/85 (76%), Positives = 75/85 (88%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEII LLT +NPLQVLV A+ GPREDSTRIG AGTVRRQAVDVSPLRRVNQA+
Sbjct: 91 IVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQAL 150
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
L+ GAREAAFRN+K+I+EC+A++
Sbjct: 151 ALITIGAREAAFRNVKSISECLAEE 175
Score = 57.2 bits (132), Expect = 1e-07
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
+INAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 176 IINAAKGSSNSYAIKKKDELERVAKSNR 203
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 101 bits (242), Expect = 5e-21
Identities = 50/85 (58%), Positives = 66/85 (77%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGRAG++RR +VDVSPL+R++ AI
Sbjct: 96 IFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMRRTSVDVSPLKRISIAI 155
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
L G R A+FRN T+AE +A++
Sbjct: 156 SNLSAGIRNASFRNRITLAEAIANE 180
Score = 39.1 bits (87), Expect = 0.031
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LI A+ S NSYA+ KK E+ER+A+SNR
Sbjct: 181 LIAASTNSQNSYAVNKKKEIERIAQSNR 208
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 94.7 bits (225), Expect = 6e-19
Identities = 45/102 (44%), Positives = 68/102 (66%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G +R+AVDVSP R+++QAI
Sbjct: 95 IVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSGQKKREAVDVSPYRKISQAI 154
Query: 181 WLLCTGAREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRR 306
+ + G ++AAF+N K+I+ + D+ L R T K++
Sbjct: 155 YFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKKK 196
Score = 31.9 bits (69), Expect = 4.8
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVA 326
++NAA+ S+ SYAIKKK +LE+ A
Sbjct: 180 ILNAARNSNTSYAIKKKLDLEKNA 203
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 90.6 bits (215), Expect = 1e-17
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I G +AVD SP RR++ A+
Sbjct: 85 IVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISYHEAVDSSPQRRLDIAL 144
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
L+ GA++ AFRN K I EC+A++
Sbjct: 145 RLITEGAQQRAFRNPKPIEECLAEE 169
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 87.8 bits (208), Expect = 7e-17
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G +VDVSP RR++ A+
Sbjct: 111 IVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYSVSVDVSPQRRLDLAL 170
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
+ GAR +F N K I EC+AD+
Sbjct: 171 RWITEGARACSFNNPKPIEECLADE 195
Score = 32.7 bits (71), Expect = 2.7
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
+I AA SYA++K++ELER+A ++R
Sbjct: 196 IIAAAANDPKSYAVRKREELERIAAASR 223
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 80.6 bits (190), Expect = 1e-14
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G Q+VDVSP RR++ A
Sbjct: 81 IIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAF 140
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
+ GA + A ++ K+IA+C+AD+
Sbjct: 141 RNISLGASQGAHKSKKSIAQCLADE 165
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 79.8 bits (188), Expect = 2e-14
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IV+ AF+I+H T ENP+QVLV+A+ N+ PRE++ R+ G QAVD +P RRV+QA+
Sbjct: 98 IVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQAL 157
Query: 181 WLLCTGAREAAFRNIKTIAECVAD 252
L GA A+F+ AE +A+
Sbjct: 158 KFLADGAHSASFKTPTDAAEALAN 181
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 77.0 bits (181), Expect = 1e-13
Identities = 36/84 (42%), Positives = 57/84 (67%)
Frame = +1
Query: 4 VKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIW 183
V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G +AVD +P RRV+ A+
Sbjct: 78 VEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALR 137
Query: 184 LLCTGAREAAFRNIKTIAECVADD 255
+ G AAF++ +++AEC+A +
Sbjct: 138 YISMGTNAAAFKSKRSVAECLATE 161
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 75.8 bits (178), Expect = 3e-13
Identities = 37/91 (40%), Positives = 62/91 (68%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G ++VDVSP RR+++A+
Sbjct: 70 VMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEAL 129
Query: 181 WLLCTGAREAAFRNIKTIAECVADD*LMQLR 273
+ GA +A+F++ I +C+A++ L+ R
Sbjct: 130 RNIARGATKASFKHKIHIQDCLANEILLAAR 160
Score = 34.7 bits (76), Expect = 0.67
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
++ AA+ +NS+AI KK+E+ERVA S R
Sbjct: 155 ILLAARNDANSFAISKKEEIERVAASAR 182
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 75.4 bits (177), Expect = 4e-13
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
+VK AF+II TG+NP+QVLV AI N+ PRED+T + G AVD+SPLRR++ A+
Sbjct: 106 VVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVAL 165
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
+ GA +R + AE +A++
Sbjct: 166 RNIALGASAKCYRTKMSFAEALAEE 190
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 65.7 bits (153), Expect = 3e-10
Identities = 33/85 (38%), Positives = 55/85 (64%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IV+ AFE+I+ T NP++VLV AI N+GPRE++ R+ G ++VD +PLRRV+ AI
Sbjct: 92 IVRDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
+ +++ ++ K + +AD+
Sbjct: 152 GFIAEAVWKSSRKSKKPASAILADE 176
Score = 34.3 bits (75), Expect = 0.89
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LI A+KG + Y++ KK+E ER+AKS R
Sbjct: 177 LIAASKGDAKCYSVGKKEEKERIAKSAR 204
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +3
Query: 273 GSSNSYAIKKKDELERVAKSNR 338
GSSNSYAIKKKDELERVAKSNR
Sbjct: 56 GSSNSYAIKKKDELERVAKSNR 77
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 37.5 bits (83), Expect = 0.096
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRIGRAGTVRRQAVDVSPLRRVNQ 174
IV AFEII + T E+PL V AI N+ P + RIG G+ + V+VS R N
Sbjct: 42 IVNAAFEIIKVKTNEDPLVVFERAIRNASPVVEVKARRIG--GSTYQVPVEVSGFRATNL 99
Query: 175 AI-WLL 189
++ W++
Sbjct: 100 SLRWII 105
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 36.3 bits (80), Expect = 0.22
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTA 72
IVKHAFEIIHLLTGE L LV A
Sbjct: 29 IVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 71 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 157
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_UPI00006A0A65 Cluster: platelet endothelial aggregation
receptor 1; n=2; Xenopus tropicalis|Rep: platelet
endothelial aggregation receptor 1 - Xenopus tropicalis
Length = 995
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Frame = -1
Query: 249 CNTLCDCFNISECSL---TCTCA---QKPDC 175
CN CDC N + CS TCTCA + PDC
Sbjct: 544 CNMTCDCKNGASCSPKDGTCTCAAGFRGPDC 574
>UniRef50_Q0D6Y0 Cluster: Os07g0420000 protein; n=3; Oryza
sativa|Rep: Os07g0420000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 262
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 218 LNAASRAPVHKSQIAWLTRRKGETSTA*RRTVPARPILVESSRGPE 81
L+A+SR P + +I RR+G + + RR+ P +P +R PE
Sbjct: 121 LHASSRVPAARHRIVCPCRRRGGSPSLTRRSSPEKPGPFSQTRSPE 166
>UniRef50_Q0C2V7 Cluster: Putative uncharacterized protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Putative
uncharacterized protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 289
Score = 31.5 bits (68), Expect = 6.3
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 180 DCLVDSAQG*NINGLTTNCTRTTDPSRIFTGSRVDNGSHEY 58
D L+D G N+ L T T PS++FT +R N Y
Sbjct: 61 DALLDDLFGLNVRALATLWVSCTQPSKLFTAARDQNWLDRY 101
>UniRef50_A4ADT7 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 382
Score = 31.5 bits (68), Expect = 6.3
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 61 LVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAE 240
LVT N+GP + +GR+ +V +V P+ RV + R A FRN IAE
Sbjct: 230 LVTPGPNTGPGNHTVNLGRSFSV---GAEVVPIERVAYYVADSAVTGRPALFRNGLEIAE 286
Query: 241 CVAD 252
+ D
Sbjct: 287 DIED 290
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 31.5 bits (68), Expect = 6.3
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
L++AAKGS + AI+KK+E R+A++NR
Sbjct: 124 LVDAAKGSGD--AIRKKEETHRMAEANR 149
>UniRef50_A2SCV2 Cluster: Putative uncharacterized protein; n=1;
Methylibium petroleiphilum PM1|Rep: Putative
uncharacterized protein - Methylibium petroleiphilum
(strain PM1)
Length = 727
Score = 31.1 bits (67), Expect = 8.3
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 28 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 162
H LTG P +VL A+IN G + D+TR G V ++PLR
Sbjct: 486 HFLTGPWP-EVLAHALINDGEQADTTR-GLLAVVPDLLASLAPLR 528
>UniRef50_A2YKM3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 225
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 218 LNAASRAPVHKSQIAWLTRRKGETSTA*RRTVPARPILVESSRGPE 81
L+A+SR P + +I RR G + + RR+ P +P +R PE
Sbjct: 49 LHASSRVPAARHRIVCPCRRHGGSPSLTRRSSPEKPGPFSQTRSPE 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,603,848
Number of Sequences: 1657284
Number of extensions: 6597477
Number of successful extensions: 16216
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 15224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16047
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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