Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30262
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 171 5e-43
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 171 5e-43
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 171 5e-43
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 171 5e-43
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 171 5e-43
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 58 8e-09
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 36 0.037
AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens ... 30 3.3
BC095477-1|AAH95477.1| 522|Homo sapiens AMIGO2 protein protein. 29 5.7
BC047595-1|AAH47595.1| 522|Homo sapiens adhesion molecule with ... 29 5.7
BC014103-1|AAH14103.2| 277|Homo sapiens AMIGO2 protein protein. 29 5.7
AY454159-1|AAR83271.1| 522|Homo sapiens DEGA/AMIGO-2 precursor ... 29 5.7
AY237005-1|AAO48946.1| 522|Homo sapiens transmembrane protein A... 29 5.7
AB080610-1|BAC81189.1| 522|Homo sapiens alivin 1 protein. 29 5.7
AB079074-1|BAC81188.1| 283|Homo sapiens alivin 1 protein. 29 5.7
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 5e-43
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI
Sbjct: 92 IVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
WLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 152 WLLCTGAREAAFRNIKTIAECLADE 176
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 5e-43
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI
Sbjct: 92 IVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
WLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 152 WLLCTGAREAAFRNIKTIAECLADE 176
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 5e-43
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI
Sbjct: 92 IVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
WLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 152 WLLCTGAREAAFRNIKTIAECLADE 176
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 171 bits (417), Expect = 5e-43
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI
Sbjct: 92 IVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
WLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 152 WLLCTGAREAAFRNIKTIAECLADE 176
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSN YAIKK+DELERVAKSNR
Sbjct: 177 LINAAKGSSNFYAIKKRDELERVAKSNR 204
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 171 bits (417), Expect = 5e-43
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 180
IVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI
Sbjct: 92 IVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAI 151
Query: 181 WLLCTGAREAAFRNIKTIAECVADD 255
WLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 152 WLLCTGAREAAFRNIKTIAECLADE 176
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 177 LINAAKGSSNSYAIKKKDELERVAKSNR 204
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 58.4 bits (135), Expect = 8e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 175 AIWLLCTGAREAAFRNIKTIAECVADD 255
AIWLLCTGAREAAFRNIKTIAEC+AD+
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADE 27
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LINAAKGSSNSYAIKKKDELERVAKSNR 338
LINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 28 LINAAKGSSNSYAIKKKDELERVAKSNR 55
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 36.3 bits (80), Expect = 0.037
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1
Query: 1 IVKHAFEIIHLLTGENPLQVLVTA 72
IVKHAFEIIHLLTGE L LV A
Sbjct: 29 IVKHAFEIIHLLTGEVGLCGLVRA 52
>AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ45969 fis, clone PLACE7016454. ).
Length = 204
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 240 LCDCFNISECSLTCTCAQKPDCLVDSAQG*NINGL 136
LC C ++ C+ C C K C S Q ++NG+
Sbjct: 45 LCVCVHVCICACICACVWKFPCRNHSVQTESLNGV 79
>BC095477-1|AAH95477.1| 522|Homo sapiens AMIGO2 protein protein.
Length = 522
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428
>BC047595-1|AAH47595.1| 522|Homo sapiens adhesion molecule with
Ig-like domain 2 protein.
Length = 522
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428
>BC014103-1|AAH14103.2| 277|Homo sapiens AMIGO2 protein protein.
Length = 277
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 147 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 183
>AY454159-1|AAR83271.1| 522|Homo sapiens DEGA/AMIGO-2 precursor
protein.
Length = 522
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428
>AY237005-1|AAO48946.1| 522|Homo sapiens transmembrane protein
AMIGO2 protein.
Length = 522
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428
>AB080610-1|BAC81189.1| 522|Homo sapiens alivin 1 protein.
Length = 522
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 392 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 428
>AB079074-1|BAC81188.1| 283|Homo sapiens alivin 1 protein.
Length = 283
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 199 AREAAFRNIKTIAECVADD*LMQLRVHLTPTPSKRRT 309
A EA T+A CVA L+ L ++LTP P K +T
Sbjct: 153 AHEAFNTAFTTLAACVASIVLVLLYLYLTPCPCKCKT 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,430,136
Number of Sequences: 237096
Number of extensions: 955144
Number of successful extensions: 1923
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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