Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30261
         (586 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007412-1|AAH07412.1|  193|Homo sapiens chromosome 14 open read...    80   5e-15
AK223103-1|BAD96823.1|  193|Homo sapiens chromosome 14 open read...    80   5e-15
AK223092-1|BAD96812.1|  193|Homo sapiens chromosome 14 open read...    80   5e-15
AB002308-1|BAA20769.4| 2388|Homo sapiens KIAA0310 protein protein.     29   9.1  

>BC007412-1|AAH07412.1|  193|Homo sapiens chromosome 14 open reading
           frame 153 protein.
          Length = 193

 Score = 80.2 bits (189), Expect = 5e-15
 Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 10/96 (10%)
 Frame = +1

Query: 250 NFKQPTNETKMEKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNL---------PE 402
           +F  P NE+ +E+  R++R E QE+NQ+FW + N  F +E+E+++   L           
Sbjct: 69  HFYIPENESPLEQKLRKLRQETQEWNQQFWANQNLTFSKEKEEFIHSRLKTKGLGLRTES 128

Query: 403 GQQ-NLSADEMSVFYKAFLDKNWKAHISYNIEWYKK 507
           GQ+  L+A+EM+ FYK FL KN++ H+ YN +WYK+
Sbjct: 129 GQKATLNAEEMADFYKEFLSKNFQKHMYYNRDWYKR 164



 Score = 29.9 bits (64), Expect = 6.9
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 188 PKKISSDMVGPPDPVSNLRRVIL----NSLQTKRKWRKL 292
           P+K   D +GPPD  SNLR V      N    ++K RKL
Sbjct: 48  PRKSCHDWIGPPDKYSNLRPVHFYIPENESPLEQKLRKL 86


>AK223103-1|BAD96823.1|  193|Homo sapiens chromosome 14 open reading
           frame 153 variant protein.
          Length = 193

 Score = 80.2 bits (189), Expect = 5e-15
 Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 10/96 (10%)
 Frame = +1

Query: 250 NFKQPTNETKMEKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNL---------PE 402
           +F  P NE+ +E+  R++R E QE+NQ+FW + N  F +E+E+++   L           
Sbjct: 69  HFYIPENESPLEQKLRKLRQETQEWNQQFWANQNLTFSKEKEEFIHSRLKTKGLGLRTES 128

Query: 403 GQQ-NLSADEMSVFYKAFLDKNWKAHISYNIEWYKK 507
           GQ+  L+A+EM+ FYK FL KN++ H+ YN +WYK+
Sbjct: 129 GQKATLNAEEMADFYKEFLSKNFQKHMYYNRDWYKR 164



 Score = 29.9 bits (64), Expect = 6.9
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 188 PKKISSDMVGPPDPVSNLRRVIL----NSLQTKRKWRKL 292
           P+K   D +GPPD  SNLR V      N    ++K RKL
Sbjct: 48  PRKSCHDWIGPPDKYSNLRPVHFYIPENESPLEQKLRKL 86


>AK223092-1|BAD96812.1|  193|Homo sapiens chromosome 14 open reading
           frame 153 variant protein.
          Length = 193

 Score = 80.2 bits (189), Expect = 5e-15
 Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 10/96 (10%)
 Frame = +1

Query: 250 NFKQPTNETKMEKTYREMRTEVQEFNQKFWTHHNTRFFQEREDYLKKNL---------PE 402
           +F  P NE+ +E+  R++R E QE+NQ+FW + N  F +E+E+++   L           
Sbjct: 69  HFYIPENESPLEQKLRKLRQETQEWNQQFWANQNLTFSKEKEEFIHSRLKTKGLGLRTES 128

Query: 403 GQQ-NLSADEMSVFYKAFLDKNWKAHISYNIEWYKK 507
           GQ+  L+A+EM+ FYK FL KN++ H+ YN +WYK+
Sbjct: 129 GQKATLNAEEMADFYKEFLSKNFQKHMYYNRDWYKR 164



 Score = 29.9 bits (64), Expect = 6.9
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = +2

Query: 188 PKKISSDMVGPPDPVSNLRRVIL----NSLQTKRKWRKL 292
           P+K   D +GPPD  SNLR V      N    ++K RKL
Sbjct: 48  PRKSCHDWIGPPDKYSNLRPVHFYIPENESPLEQKLRKL 86


>AB002308-1|BAA20769.4| 2388|Homo sapiens KIAA0310 protein protein.
          Length = 2388

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 128 SYLLLRQLNTND--SKCVQIPNPKKISSDMVGPPDPVSNLRRVILNSLQTKRK 280
           SY+LL  +++ D     V  P P+ + S M GPP P  N R V   S   +R+
Sbjct: 14  SYILLPSVSSIDLCKGSVMQPPPQTVPSGMAGPP-PAGNPRSVFWASSPYRRR 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,682,313
Number of Sequences: 237096
Number of extensions: 1299448
Number of successful extensions: 3133
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3130
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)