Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30260
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   0.83 
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   2.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   7.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.8  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.8  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 469 QQINHIFSKYGPVAKCKL 522
           ++I  +  KY P+A CKL
Sbjct: 35  EEIKDLLQKYPPIANCKL 52


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 468 FSCIKTKSKNPEAPRGG 418
           F  +KT+S +PEA  GG
Sbjct: 19  FVVVKTRSNSPEAGGGG 35


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 468 FSCIKTKSKNPEAPRGG 418
           F  +KT+S +PEA  GG
Sbjct: 19  FVVVKTRSNSPEAGGGG 35


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 695 CRCPSGSVSSLCYGIID 645
           C+CP G V   C G I+
Sbjct: 284 CKCPPGFVGPRCEGDIN 300



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 695 CRCPSGSVSSLC 660
           C CPSG++  +C
Sbjct: 246 CSCPSGTLGYIC 257


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 324 TPGLITPQS*SQPYVIPAPSSR*QGETFGKHYPLSVPR 437
           +P  + PQ    PY  PAP    Q  T G +  L   R
Sbjct: 44  SPPQVAPQYPQHPYAAPAPGHGLQ-PTMGDYTQLQPQR 80


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 216 LAENIEARHTPDRIPFRLG 272
           L ENI+ RH    IPF  G
Sbjct: 413 LPENIQKRHPFAYIPFSAG 431


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 216 LAENIEARHTPDRIPFRLG 272
           L ENI+ RH    IPF  G
Sbjct: 413 LPENIQKRHPFAYIPFSAG 431


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 157 RRFRYRLARTVASPRTTSLSIRHSDV 80
           RR+R+R+  + AS     L+I+  D+
Sbjct: 342 RRYRFRMINSFASVCPAQLTIQGHDL 367


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 157 RRFRYRLARTVASPRTTSLSIRHSDV 80
           RR+R+R+  + AS     L+I+  D+
Sbjct: 342 RRYRFRMINSFASVCPAQLTIQGHDL 367


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 647 RLFHNTASSHSHSGIYMGKPPI 712
           R F    +  +H G++  KPP+
Sbjct: 170 RAFTTKGNLKTHMGVHRAKPPM 191


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 498 WTRCKVQVVIDAKTGRSRGFCFVYF 572
           WTR    +   AK  +++ +C+ Y+
Sbjct: 94  WTRLLKNLESCAKIKKTKRYCYYYY 118


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 64  SLINYEHRYV*SREKSFEDSQRFSR 138
           S ++ EH YV  R   F DS + S+
Sbjct: 33  SFVHKEHCYVLVRLARFRDSVKLSK 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,879
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)