Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30260
(732 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 44 2e-05
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 44 2e-05
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 42 1e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 41 2e-04
SPBC13A2.01c |||nuclear cap-binding complex small subunit|Schizo... 38 0.002
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 37 0.003
SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein Usp102|Schi... 36 0.006
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 35 0.010
SPBC18H10.04c |sce3|tif48|translation initiation factor eIF4B|Sc... 35 0.010
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 35 0.014
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 34 0.018
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 34 0.024
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 33 0.032
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 33 0.042
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 33 0.042
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 33 0.042
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 33 0.042
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 31 0.13
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 31 0.17
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 30 0.39
SPBC29A3.07c |||U2 snRNP-associated protein Sf3b14 homolog |Schi... 29 0.52
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 29 0.52
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 29 0.52
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 29 0.68
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 2.8
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 27 3.6
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 26 4.8
SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces pom... 26 6.4
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 44.4 bits (100), Expect = 2e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3
Query: 540 GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPT 683
GR GF FV+ +D + A+ A N G EIDGR I VD+++++ A T
Sbjct: 145 GRMCGFAFVWMKDRKAAEEAMNSLNGTEIDGRPIAVDWAVSKDAFEAT 192
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3
Query: 519 VVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
VV + +TG +RG+ FV F +EDA+ A E ++ GR +R+D++ ++
Sbjct: 36 VVTNPETGENRGYGFVTFSMLEDAQRAAKELKNKKLHGRILRLDFATPRK 85
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650
+++VV + TG+S G+ FV FE D K+A G+ ++GRRI VD
Sbjct: 128 RIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAGLMLNGRRIVVD 174
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPTRAS 692
+ +V D +TG+S+GF F+ +ED +A + T +++ R +RVD+ + + P +
Sbjct: 60 INLVRDKETGKSKGFAFLKYEDQRSTVLAVDNMTNVKLLDRLVRVDHVASYK--VPQKEK 117
Query: 693 TWANLQ*VAEA 725
ANL + E+
Sbjct: 118 EPANLVPLGES 128
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+V++D ++GRS+G+ +V FE E AK A EIDGR + +D S
Sbjct: 293 RVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLS 339
Score = 34.7 bits (76), Expect = 0.014
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+++ D ++GR +GF +V F D++ AK E G I GR R+D+S
Sbjct: 395 IRLPTDPQSGRLKGFGYVTFSDIDSAKKCV-EMNGHFIAGRPCRLDFS 441
>SPBC13A2.01c |||nuclear cap-binding complex small
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 397 VRLLENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGF 558
+R L+ S C+ V LS YTTE+QI +FSK G + + + + + P GF
Sbjct: 22 LRALDAVKQSNCVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGF 75
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 525 IDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650
+D T GFCFV + + +DA + + +D R IR D
Sbjct: 65 VDRFTKTPCGFCFVEYFENQDALDSLKYISRTSLDERIIRAD 106
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPT 683
V+++ + T SRGF F+ F +E+A A + E GR + V + R H+PT
Sbjct: 130 VRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKAKRSRPHSPT 186
>SPBC4B4.07c |usp102|mud1|U1 snRNP-associated protein
Usp102|Schizosaccharomyces pombe|chr 2|||Manual
Length = 249
Score = 35.9 bits (79), Expect = 0.006
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
RG FV ++ +A +AKN TGM + G +I+V ++
Sbjct: 210 RGIAFVEYDSDREATVAKNGTTGMSLSGNQIKVTFA 245
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 35.1 bits (77), Expect = 0.010
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
++V+D +TG +G+ F F D E +A + E+ R+IRV++
Sbjct: 37 KLVLDPETGSGKGYGFCEFFDSETTAMAVRKLNNSELGPRKIRVEF 82
>SPBC18H10.04c |sce3|tif48|translation initiation factor
eIF4B|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 35.1 bits (77), Expect = 0.010
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPTRAS 692
+++VID T RSRGF +V FE D A +G ++ GR +R+ + +R+ S
Sbjct: 121 IRLVIDPLTERSRGFGYVEFE-TADTLSAALALSGEDLMGRPVRITVAEPRRSFAREERS 179
Query: 693 T 695
T
Sbjct: 180 T 180
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 34.7 bits (76), Expect = 0.014
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 498 WTRCK-VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQ-RA 671
+ CK +++ D +T SRG+ FV F D D K A E G R IRV + + +A
Sbjct: 210 YNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKA 269
Query: 672 H 674
H
Sbjct: 270 H 270
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 34.3 bits (75), Expect = 0.018
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
QV+ D +TG S + F+ F++ E + A + + ID RI VD+S
Sbjct: 274 QVIRDKETGDSLQYAFIEFDNKESVEKAYFKMQNVLIDDSRIHVDFS 320
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 33.9 bits (74), Expect = 0.024
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
Q++ + G S+GFCF F++ DA++A + G + G ++ ++
Sbjct: 340 QLIKNIADGSSKGFCFCEFKNPSDAEVAISGLDGKDTYGNKLHAQFA 386
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 33.5 bits (73), Expect = 0.032
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 540 GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
G RG F F E+A++ G EI+GRR+RV++
Sbjct: 240 GIFRGLAFANFYRPEEAQVVVQTLNGYEINGRRLRVEW 277
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 33.1 bits (72), Expect = 0.042
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 537 TGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
TGRS+GF V FE+ DA + + G GR +++ Y+
Sbjct: 316 TGRSKGFGVVQFENENDAASSIEKLNGYRYGGRPLQLSYA 355
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 33.1 bits (72), Expect = 0.042
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
+V + ID KT +GF ++ F D +DA A E GR + V
Sbjct: 351 QVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLELDAKPFQGRLLHV 396
Score = 28.7 bits (61), Expect = 0.90
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
S GF FV F+D A A + G +DG ++ + S
Sbjct: 664 SMGFGFVEFKDKASAVAAMHAMNGFVLDGHKLEIKLS 700
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRA 671
V K G SR F F+ F++ EDA A ++ RI V ++ R+
Sbjct: 37 VAKTKEGVSRRFAFIGFKNEEDADKAIRYLNKSYVETSRIEVHRALDYRS 86
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 33.1 bits (72), Expect = 0.042
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
Q+VID ++G+ +G+ F + D A A + RR+RVD+
Sbjct: 35 QLVIDPESGQPKGYGFCEYHDPATAASAVRNLNNYDAGTRRLRVDF 80
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 33.1 bits (72), Expect = 0.042
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 534 KTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
+ GRS G C VYFE +DA+ A+ + G I++
Sbjct: 119 RAGRSEGSCDVYFETSQDAEDAQKTLQSTNLKGSEIQI 156
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
R + FV F++ +DA A +E +DGR IR++ + R
Sbjct: 121 RPYSFVQFQNTDDASKALSEAQNTILDGRHIRIERAKVNR 160
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 31.1 bits (67), Expect = 0.17
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+V + D +TGR++GF FV + D + A A++ G + +R ++S
Sbjct: 230 RVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILRCEFS 278
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 29.9 bits (64), Expect = 0.39
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 439 VFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFA 561
V G+ TE+Q+ +F+ +GPV L L +R +G+A
Sbjct: 14 VTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYA 54
>SPBC29A3.07c |||U2 snRNP-associated protein Sf3b14 homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 137
Score = 29.5 bits (63), Expect = 0.52
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 537 TGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRA 671
T ++RG FV +E+++DA+ A + +G R + V Y +RA
Sbjct: 46 TVQTRGTAFVVYENVQDARRACEKLSGYNFMDRYLVVHYYNPERA 90
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 29.5 bits (63), Expect = 0.52
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 504 RCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG--MEIDGRRIRVDYS 656
RC + + +T SR F FV +ED DA+ A E G +E G +RV+++
Sbjct: 35 RCDIPI---PRTRTSRPFAFVEYEDSRDAEDAYYEVHGRRLERGGGVLRVEWA 84
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 29.5 bits (63), Expect = 0.52
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
K +VV D + G++RGF FV F+D + A E G I R +++
Sbjct: 58 KTKVVRD-REGKTRGFGFVSFKDSDQFLKAWREKNGKYIGSRPVKL 102
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 29.1 bits (62), Expect = 0.68
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650
++D K GF FV ED DA+ N+ G E G RI V+
Sbjct: 30 ILDCKL--MNGFGFVEVEDARDARDIVNDFQGKEFMGSRIVVE 70
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDM--EDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPTR 686
V++V D KT +GF ++ F+D D + NE E GR +R+ + + + + TR
Sbjct: 299 VRIVRDPKTNLGKGFAYIQFKDTMGVDKALLLNEKKMPE--GRTLRIMRAKSTKPKSITR 356
Query: 687 A 689
+
Sbjct: 357 S 357
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 519 VVIDAKTGRSRGFCFVYFED---MEDAKIAKNECTGMEIDGRR 638
V+ D+ TGRSRGF F+ F++ + + ++ G ID +R
Sbjct: 194 VMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKR 236
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 519 VVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
+++D TGR RGF FV +E+ E A A + I G+ + V
Sbjct: 278 LMMDKDTGRPRGFGFVTYEN-ESAVEATMSQPYITIHGKPVEV 319
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDG-RRIRVD 650
CK + GRS+G + F DA A + G +DG R+++V+
Sbjct: 82 CKRVSLAYGPNGRSKGIATIIFSRPGDATRAYEQYEGRLVDGTRKMKVE 130
>SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 453
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
Frame = -3
Query: 565 TKQNPRERPVF--ASI---TTCTLQRVHT*KRYG 479
T ++P +P F SI TTC +++VHT +R+G
Sbjct: 37 TSRSPYHKPYFYGPSIDFPTTCKIKQVHTLQRHG 70
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,773,599
Number of Sequences: 5004
Number of extensions: 54759
Number of successful extensions: 194
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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