BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30260 (732 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 65 4e-11 AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 48 9e-06 AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 48 9e-06 Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 3e-05 AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 1e-04 Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 43 2e-04 Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 3e-04 Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 43 3e-04 U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 41 8e-04 Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 38 0.006 Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.006 U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.006 DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.006 Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 37 0.013 Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 37 0.013 Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.013 U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 36 0.030 U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 36 0.030 AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 36 0.030 AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.039 AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.039 Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.068 AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.068 U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 34 0.090 U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 34 0.090 Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.21 Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.28 Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.36 Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.36 Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.36 U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 31 0.64 AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 31 0.64 AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 31 0.64 AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 31 0.64 AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.84 AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.84 Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.1 Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1 Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 31 1.1 U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1 U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 1.1 D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.1 AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.1 AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.1 AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.1 AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.1 Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 30 1.9 Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 30 1.9 U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 2.6 U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 2.6 U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 2.6 Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 29 3.4 AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 29 3.4 AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.4 AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 29 3.4 AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 29 3.4 Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 29 4.5 U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 29 4.5 U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 5.9 U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 5.9 AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical... 28 5.9 Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical pr... 28 7.8 >Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical protein C18D11.4 protein. Length = 309 Score = 65.3 bits (152), Expect = 4e-11 Identities = 27/58 (46%), Positives = 41/58 (70%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPT 683 K +V D +G SRGF F+YF +EDA A+++ ++DG +IRVD+S+T+R H+PT Sbjct: 104 KCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPT 161 Score = 51.2 bits (117), Expect = 7e-07 Identities = 20/38 (52%), Positives = 27/38 (71%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522 EN PS+CLGVF LS YTTE+ + +F ++G + KC L Sbjct: 70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDL 107 >AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical protein Y111B2A.18 protein. Length = 258 Score = 47.6 bits (108), Expect = 9e-06 Identities = 22/44 (50%), Positives = 28/44 (63%) Frame = +3 Query: 525 IDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 +D K+GR F FV FED DA+ A G E DGRRIRV+++ Sbjct: 38 VDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81 >AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. Length = 258 Score = 47.6 bits (108), Expect = 9e-06 Identities = 22/44 (50%), Positives = 28/44 (63%) Frame = +3 Query: 525 IDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 +D K+GR F FV FED DA+ A G E DGRRIRV+++ Sbjct: 38 VDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81 >Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical protein R06C1.4 protein. Length = 84 Score = 46.0 bits (104), Expect = 3e-05 Identities = 20/48 (41%), Positives = 31/48 (64%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 V++V D +TGR RGF FV F + A+ A + G+ +GR +RV+Y+ Sbjct: 35 VRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYA 82 >AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical protein Y116A8C.34 protein. Length = 331 Score = 43.6 bits (98), Expect = 1e-04 Identities = 20/64 (31%), Positives = 38/64 (59%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPTRAS 692 + + +D ++G+ RGF FV F+ EDA +A + E+ G+ IRV+++ +A ++ Sbjct: 40 ISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKP 99 Query: 693 TWAN 704 WA+ Sbjct: 100 VWAD 103 >Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical protein F56A8.6 protein. Length = 336 Score = 43.2 bits (97), Expect = 2e-04 Identities = 17/46 (36%), Positives = 31/46 (67%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650 +++V D +TG+ +G+ F+ F D++ A++A G E+ GR +RVD Sbjct: 47 IKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVD 92 >Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical protein R09B3.3 protein. Length = 85 Score = 42.7 bits (96), Expect = 3e-04 Identities = 19/46 (41%), Positives = 31/46 (67%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650 V++V D +TGR RGF FV F + A+ A ++ G++ +GR +RV+ Sbjct: 33 VRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVN 78 >Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical protein R09B3.2 protein. Length = 83 Score = 42.7 bits (96), Expect = 3e-04 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650 V++V D +TGR RGF F+ F + A+ A + G E +GR +RV+ Sbjct: 34 VRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVN 79 >U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna binding domain) containingprotein 7 protein. Length = 332 Score = 41.1 bits (92), Expect = 8e-04 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = +3 Query: 489 F*VWTRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY--SIT 662 F + + K ++ + G+ RG+ F+ + D + A + G+++DG+R+ VDY T Sbjct: 124 FEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYERGRT 183 Query: 663 QRAHTPTR 686 Q+ P R Sbjct: 184 QKTWLPRR 191 >Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical protein R74.5b protein. Length = 286 Score = 38.3 bits (85), Expect = 0.006 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +3 Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674 S+GF FV ++ +DA A+ E G I+GRR+ V+ + TQR H Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-TQRVH 61 >Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical protein R74.5a protein. Length = 404 Score = 38.3 bits (85), Expect = 0.006 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +3 Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674 S+GF FV ++ +DA A+ E G I+GRR+ V+ + TQR H Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-TQRVH 179 >U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical protein C30B5.4 protein. Length = 302 Score = 38.3 bits (85), Expect = 0.006 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653 + ++ D TG+S+GF F+ ++D +A + G+ + R IRVD+ Sbjct: 67 INLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDH 113 >DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding protein ASD-1 protein. Length = 404 Score = 38.3 bits (85), Expect = 0.006 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +3 Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674 S+GF FV ++ +DA A+ E G I+GRR+ V+ + TQR H Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-TQRVH 179 >Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical protein W02B12.3c protein. Length = 150 Score = 37.1 bits (82), Expect = 0.013 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 GF FV F+D DA+ A ++ G E+ G R+ +DYS Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71 >Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical protein W02B12.3b protein. Length = 148 Score = 37.1 bits (82), Expect = 0.013 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 GF FV F+D DA+ A ++ G E+ G R+ +DYS Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71 >Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical protein W02B12.3a protein. Length = 312 Score = 37.1 bits (82), Expect = 0.013 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 GF FV F+D DA+ A ++ G E+ G R+ +DYS Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71 >U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on x protein 1 protein. Length = 415 Score = 35.9 bits (79), Expect = 0.030 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = +3 Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHT 677 S+GF FV E +DA+ A+ E G I+GR+I V+ + T R H+ Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA-TARVHS 233 >U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein protein. Length = 415 Score = 35.9 bits (79), Expect = 0.030 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = +3 Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHT 677 S+GF FV E +DA+ A+ E G I+GR+I V+ + T R H+ Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA-TARVHS 233 >AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily assigned gene nameprotein 262 protein. Length = 302 Score = 35.9 bits (79), Expect = 0.030 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 K +VV +++T +S+G+ FV F D ED A E G + R I++ Sbjct: 231 KAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKL 276 >AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical protein Y55F3AM.3c protein. Length = 435 Score = 35.5 bits (78), Expect = 0.039 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 V+++ D++TGRS+G C+V F D E + G + G +++ + +R Sbjct: 54 VRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRLMGAPLQIQRTCAER 104 Score = 31.1 bits (67), Expect = 0.84 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTP 680 K+ + +D+ +RGF + F + +DA+ + + E+ GR IR+ SI Q + P Sbjct: 155 KIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL--SIKQESQAP 208 >AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical protein Y55F3AM.3a protein. Length = 580 Score = 35.5 bits (78), Expect = 0.039 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 V+++ D++TGRS+G C+V F D E + G + G +++ + +R Sbjct: 199 VRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRLMGAPLQIQRTCAER 249 Score = 31.1 bits (67), Expect = 0.84 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTP 680 K+ + +D+ +RGF + F + +DA+ + + E+ GR IR+ SI Q + P Sbjct: 300 KIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL--SIKQESQAP 353 >Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein T23F6.4 protein. Length = 872 Score = 34.7 bits (76), Expect = 0.068 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 +VQVVID KTG +GF V F E A A + G GR + + Sbjct: 307 EVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHI 352 >AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical protein F58D5.1 protein. Length = 611 Score = 34.7 bits (76), Expect = 0.068 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEID-GRRIRVDYSI 659 +++++D +G SRG+ FV + + EDA A G EI G+ ++V+ SI Sbjct: 229 LRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSI 278 >U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (splicing factor) protein4, isoform b protein. Length = 126 Score = 34.3 bits (75), Expect = 0.090 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 V + D + +S+GF FV F + DA+ A + G +DGR +RV Sbjct: 48 VHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92 >U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (splicing factor) protein4, isoform a protein. Length = 196 Score = 34.3 bits (75), Expect = 0.090 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 V + D + +S+GF FV F + DA+ A + G +DGR +RV Sbjct: 48 VHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92 >Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical protein F26A3.2 protein. Length = 154 Score = 33.1 bits (72), Expect = 0.21 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653 GFCFV + EDA++A + +D R IR D+ Sbjct: 79 GFCFVEYYTREDAELALQNISNTRMDDRVIRADW 112 >Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical protein F35H8.5 protein. Length = 456 Score = 32.7 bits (71), Expect = 0.28 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = +3 Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 ++V D TG+S G+ FV + EDA A + G+ + + I+V Y+ Sbjct: 72 KLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118 >Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical protein F39H2.2a protein. Length = 427 Score = 32.3 bits (70), Expect = 0.36 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = +3 Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 ++V D ++G S + F+ F++ + + A + + ID RRI VD+S Sbjct: 271 EIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 317 Score = 27.9 bits (59), Expect = 7.8 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522 + P L V L+ TT++ + IFS++G + C++ Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272 >Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical protein F39H2.2a protein. Length = 427 Score = 32.3 bits (70), Expect = 0.36 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = +3 Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 ++V D ++G S + F+ F++ + + A + + ID RRI VD+S Sbjct: 271 EIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 317 Score = 27.9 bits (59), Expect = 7.8 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522 + P L V L+ TT++ + IFS++G + C++ Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272 >Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical protein F39H2.2b protein. Length = 358 Score = 32.3 bits (70), Expect = 0.36 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = +3 Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 ++V D ++G S + F+ F++ + + A + + ID RRI VD+S Sbjct: 202 EIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 248 Score = 27.9 bits (59), Expect = 7.8 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522 + P L V L+ TT++ + IFS++G + C++ Sbjct: 166 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 203 >U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-binding protein protein. Length = 646 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +3 Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 CKV + D G S+G+ FV+FE E A+ A + GM + G+++ V Sbjct: 149 CKVAIDED---GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192 Score = 28.3 bits (60), Expect = 5.9 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +3 Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+ Sbjct: 240 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 291 Score = 28.3 bits (60), Expect = 5.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNE 608 V+ + GRS+GF FV FE E+A A E Sbjct: 348 VMTDENGRSKGFGFVCFEKPEEATSAVTE 376 >AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical protein Y106G6H.2b protein. Length = 583 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +3 Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 CKV + D G S+G+ FV+FE E A+ A + GM + G+++ V Sbjct: 86 CKVAIDED---GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129 Score = 29.1 bits (62), Expect = 3.4 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +3 Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 V+ + GRS+GF FV FE E+A A E + + + V +I QR Sbjct: 285 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQR 331 Score = 28.3 bits (60), Expect = 5.9 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +3 Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+ Sbjct: 177 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 228 >AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical protein Y106G6H.2a protein. Length = 646 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/47 (38%), Positives = 28/47 (59%) Frame = +3 Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 CKV + D G S+G+ FV+FE E A+ A + GM + G+++ V Sbjct: 149 CKVAIDED---GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192 Score = 29.1 bits (62), Expect = 3.4 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +3 Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 V+ + GRS+GF FV FE E+A A E + + + V +I QR Sbjct: 348 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQR 394 Score = 28.3 bits (60), Expect = 5.9 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +3 Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+ Sbjct: 240 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 291 >AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical protein C50D2.5 protein. Length = 138 Score = 31.5 bits (68), Expect = 0.64 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +3 Query: 537 TGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653 T +RG FV +ED+ DAK A +G + R + V Y Sbjct: 53 TAETRGTAFVVYEDIFDAKTACEHLSGYNVSNRYLVVLY 91 >AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to drosophila sqd (squid)protein protein 1, isoform a protein. Length = 305 Score = 31.1 bits (67), Expect = 0.84 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 599 + QV D GRSRGF FV F E K+A Sbjct: 57 QAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86 >AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to drosophila sqd (squid)protein protein 1, isoform b protein. Length = 308 Score = 31.1 bits (67), Expect = 0.84 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 599 + QV D GRSRGF FV F E K+A Sbjct: 57 QAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86 >Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical protein W02B12.2 protein. Length = 281 Score = 30.7 bits (66), Expect = 1.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653 GF FV F+D DA A ++ G E+ G R+ +++ Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKELCGERVILEF 69 >Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein C08B11.5 protein. Length = 388 Score = 30.7 bits (66), Expect = 1.1 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +3 Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 +++ D +G S+GF F+ F E + A G + R I V Y+ Sbjct: 131 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 177 >Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical protein R07E5.14 protein. Length = 142 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/55 (21%), Positives = 30/55 (54%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHT 677 + + +D +TG +G+ V +E ++A A ++ ++ G+ ++VD+ + T Sbjct: 84 IHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVDWCFVKGKKT 138 >U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding protein protein. Length = 398 Score = 30.7 bits (66), Expect = 1.1 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +3 Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 +++ D +G S+GF F+ F E + A G + R I V Y+ Sbjct: 141 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 187 >U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna binding domain) containingprotein 5 protein. Length = 289 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/41 (29%), Positives = 27/41 (65%) Frame = +3 Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRA 671 RG+ +V ++++EDA+ + G +IDG + V+ +I +++ Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQS 215 >D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein protein. Length = 346 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570 E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161 >AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform b protein. Length = 309 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570 E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123 >AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform c protein. Length = 308 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570 E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123 >AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform d protein. Length = 347 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570 E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161 >AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform a protein. Length = 346 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570 E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161 >Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical protein F18H3.3b protein. Length = 566 Score = 29.9 bits (64), Expect = 1.9 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 T +V++D + GRS+GF FV FE E+A A + I + + V Sbjct: 368 TITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 540 GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 G S+G+ FV+FE A+ A + GM + +++ V Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217 >Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical protein F18H3.3a protein. Length = 692 Score = 29.9 bits (64), Expect = 1.9 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +3 Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 T +V++D + GRS+GF FV FE E+A A + I + + V Sbjct: 368 TITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +3 Query: 540 GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 G S+G+ FV+FE A+ A + GM + +++ V Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217 >U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform b protein. Length = 166 Score = 29.5 bits (63), Expect = 2.6 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 GF FV FED DA+ A ++ G ++G +R+ Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67 >U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform d protein. Length = 208 Score = 29.5 bits (63), Expect = 2.6 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 GF FV FED DA+ A ++ G ++G +R+ Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67 >U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (splicing factor) protein5, isoform a protein. Length = 208 Score = 29.5 bits (63), Expect = 2.6 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647 GF FV FED DA+ A ++ G ++G +R+ Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67 >Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical protein F11A10.7 protein. Length = 394 Score = 29.1 bits (62), Expect = 3.4 Identities = 15/54 (27%), Positives = 31/54 (57%) Frame = +3 Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674 V++V D TG+ +GF FV F+ +A + T ++++ R +R+ + ++ H Sbjct: 276 VRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMET-IKMEKRDLRIT-KVMKKGH 327 >AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical protein Y106G6H.2c protein. Length = 586 Score = 29.1 bits (62), Expect = 3.4 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +3 Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 V+ + GRS+GF FV FE E+A A E + + + V +I QR Sbjct: 288 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQR 334 Score = 28.3 bits (60), Expect = 5.9 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +3 Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668 T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+ Sbjct: 180 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 231 >AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical protein H28G03.1b protein. Length = 315 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +1 Query: 427 RCLGVFGLSLYTTEQQINHIFSKYGPV 507 R L + GLS TT++Q+ + FS++GPV Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPV 75 >AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical protein H28G03.1c protein. Length = 335 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +1 Query: 427 RCLGVFGLSLYTTEQQINHIFSKYGPV 507 R L + GLS TT++Q+ + FS++GPV Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPV 95 >AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical protein H28G03.1a protein. Length = 336 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +1 Query: 427 RCLGVFGLSLYTTEQQINHIFSKYGPV 507 R L + GLS TT++Q+ + FS++GPV Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPV 96 >Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical protein F22B5.2 protein. Length = 256 Score = 28.7 bits (61), Expect = 4.5 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656 ++ + D TG +GF FV FE +DA A E + + ++V+++ Sbjct: 204 RIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEWT 252 >U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical protein ZK1248.7 protein. Length = 363 Score = 28.7 bits (61), Expect = 4.5 Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%) Frame = +1 Query: 382 HLGDRVRLLENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFA 561 H+ + + LLEN S+C F + T+ I H+ KY + + + ++Q + + A Sbjct: 23 HMDNIISLLENAAASKCKFAFVI----TDDSITHLHKKYKALEQKSMMVIQDMKISK--A 76 Query: 562 SFTLRTWKMLRLQR-MNAPEWKL 627 + ++ K L L+ +N KL Sbjct: 77 NSVVKDGKRLTLENVINKTNMKL 99 >U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical protein F25B5.7d protein. Length = 374 Score = 28.3 bits (60), Expect = 5.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSI 659 +GF F+ + A+ AK G I GR++RV +++ Sbjct: 150 KGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAV 186 >U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical protein F25B5.7a protein. Length = 562 Score = 28.3 bits (60), Expect = 5.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSI 659 +GF F+ + A+ AK G I GR++RV +++ Sbjct: 150 KGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAV 186 >AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical protein Y22D7AR.12 protein. Length = 1137 Score = 28.3 bits (60), Expect = 5.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNE 608 K V++ GRSR CF Y E + +AKN+ Sbjct: 982 KTPVIVHCYDGRSRSACFAYME-LACQMVAKND 1013 >Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical protein F09F3.2 protein. Length = 323 Score = 27.9 bits (59), Expect = 7.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 Query: 602 LCNLSIFHVLKVNEAKPSGTARLC 531 +CNL +F+ +KPSG +LC Sbjct: 33 ICNLYLFYKFVTRASKPSGFQKLC 56 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,726,801 Number of Sequences: 27780 Number of extensions: 326449 Number of successful extensions: 994 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 887 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 993 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1714401074 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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