Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30260
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 48 9e-06
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 48 9e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 1e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 41 8e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.006
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.006
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.006
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 37 0.013
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 36 0.030
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 36 0.030
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 36 0.030
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.039
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.039
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.068
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.068
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 34 0.090
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 34 0.090
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.36
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 31 0.64
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 31 0.64
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 31 0.64
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 31 0.64
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.84
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.84
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 1.1
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 1.1
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 1.1
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 1.1
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 30 1.9
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 2.6
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 2.6
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 2.6
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 29 3.4
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.4
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 29 3.4
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 29 3.4
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 29 4.5
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 29 4.5
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 5.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 5.9
AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical... 28 5.9
Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPT 683
K +V D +G SRGF F+YF +EDA A+++ ++DG +IRVD+S+T+R H+PT
Sbjct: 104 KCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPT 161
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522
EN PS+CLGVF LS YTTE+ + +F ++G + KC L
Sbjct: 70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDL 107
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +3
Query: 525 IDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+D K+GR F FV FED DA+ A G E DGRRIRV+++
Sbjct: 38 VDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +3
Query: 525 IDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+D K+GR F FV FED DA+ A G E DGRRIRV+++
Sbjct: 38 VDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
V++V D +TGR RGF FV F + A+ A + G+ +GR +RV+Y+
Sbjct: 35 VRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRVNYA 82
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/64 (31%), Positives = 38/64 (59%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTPTRAS 692
+ + +D ++G+ RGF FV F+ EDA +A + E+ G+ IRV+++ +A ++
Sbjct: 40 ISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKP 99
Query: 693 TWAN 704
WA+
Sbjct: 100 VWAD 103
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/46 (36%), Positives = 31/46 (67%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650
+++V D +TG+ +G+ F+ F D++ A++A G E+ GR +RVD
Sbjct: 47 IKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVD 92
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650
V++V D +TGR RGF FV F + A+ A ++ G++ +GR +RV+
Sbjct: 33 VRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRVN 78
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 650
V++V D +TGR RGF F+ F + A+ A + G E +GR +RV+
Sbjct: 34 VRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVN 79
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 489 F*VWTRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY--SIT 662
F + + K ++ + G+ RG+ F+ + D + A + G+++DG+R+ VDY T
Sbjct: 124 FEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYERGRT 183
Query: 663 QRAHTPTR 686
Q+ P R
Sbjct: 184 QKTWLPRR 191
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674
S+GF FV ++ +DA A+ E G I+GRR+ V+ + TQR H
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-TQRVH 61
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674
S+GF FV ++ +DA A+ E G I+GRR+ V+ + TQR H
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-TQRVH 179
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
+ ++ D TG+S+GF F+ ++D +A + G+ + R IRVD+
Sbjct: 67 INLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDH 113
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674
S+GF FV ++ +DA A+ E G I+GRR+ V+ + TQR H
Sbjct: 138 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA-TQRVH 179
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
GF FV F+D DA+ A ++ G E+ G R+ +DYS
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
GF FV F+D DA+ A ++ G E+ G R+ +DYS
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
GF FV F+D DA+ A ++ G E+ G R+ +DYS
Sbjct: 37 GFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHT 677
S+GF FV E +DA+ A+ E G I+GR+I V+ + T R H+
Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA-TARVHS 233
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 546 SRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHT 677
S+GF FV E +DA+ A+ E G I+GR+I V+ + T R H+
Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCA-TARVHS 233
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
K +VV +++T +S+G+ FV F D ED A E G + R I++
Sbjct: 231 KAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKL 276
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
V+++ D++TGRS+G C+V F D E + G + G +++ + +R
Sbjct: 54 VRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRLMGAPLQIQRTCAER 104
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTP 680
K+ + +D+ +RGF + F + +DA+ + + E+ GR IR+ SI Q + P
Sbjct: 155 KIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL--SIKQESQAP 208
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
V+++ D++TGRS+G C+V F D E + G + G +++ + +R
Sbjct: 199 VRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRLMGAPLQIQRTCAER 249
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHTP 680
K+ + +D+ +RGF + F + +DA+ + + E+ GR IR+ SI Q + P
Sbjct: 300 KIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELAGRCIRL--SIKQESQAP 353
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
+VQVVID KTG +GF V F E A A + G GR + +
Sbjct: 307 EVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHI 352
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEID-GRRIRVDYSI 659
+++++D +G SRG+ FV + + EDA A G EI G+ ++V+ SI
Sbjct: 229 LRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSI 278
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
V + D + +S+GF FV F + DA+ A + G +DGR +RV
Sbjct: 48 VHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
V + D + +S+GF FV F + DA+ A + G +DGR +RV
Sbjct: 48 VHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
GFCFV + EDA++A + +D R IR D+
Sbjct: 79 GFCFVEYYTREDAELALQNISNTRMDDRVIRADW 112
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
++V D TG+S G+ FV + EDA A + G+ + + I+V Y+
Sbjct: 72 KLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
++V D ++G S + F+ F++ + + A + + ID RRI VD+S
Sbjct: 271 EIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 317
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522
+ P L V L+ TT++ + IFS++G + C++
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
++V D ++G S + F+ F++ + + A + + ID RRI VD+S
Sbjct: 271 EIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 317
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522
+ P L V L+ TT++ + IFS++G + C++
Sbjct: 235 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
++V D ++G S + F+ F++ + + A + + ID RRI VD+S
Sbjct: 202 EIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFS 248
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL 522
+ P L V L+ TT++ + IFS++G + C++
Sbjct: 166 DEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 203
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
CKV + D G S+G+ FV+FE E A+ A + GM + G+++ V
Sbjct: 149 CKVAIDED---GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+
Sbjct: 240 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 291
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNE 608
V+ + GRS+GF FV FE E+A A E
Sbjct: 348 VMTDENGRSKGFGFVCFEKPEEATSAVTE 376
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
CKV + D G S+G+ FV+FE E A+ A + GM + G+++ V
Sbjct: 86 CKVAIDED---GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
V+ + GRS+GF FV FE E+A A E + + + V +I QR
Sbjct: 285 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQR 331
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+
Sbjct: 177 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 228
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 507 CKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
CKV + D G S+G+ FV+FE E A+ A + GM + G+++ V
Sbjct: 149 CKVAIDED---GFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
V+ + GRS+GF FV FE E+A A E + + + V +I QR
Sbjct: 348 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQR 394
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+
Sbjct: 240 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 291
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 537 TGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
T +RG FV +ED+ DAK A +G + R + V Y
Sbjct: 53 TAETRGTAFVVYEDIFDAKTACEHLSGYNVSNRYLVVLY 91
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 599
+ QV D GRSRGF FV F E K+A
Sbjct: 57 QAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 599
+ QV D GRSRGF FV F E K+A
Sbjct: 57 QAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 653
GF FV F+D DA A ++ G E+ G R+ +++
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKELCGERVILEF 69
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+++ D +G S+GF F+ F E + A G + R I V Y+
Sbjct: 131 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 177
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/55 (21%), Positives = 30/55 (54%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAHT 677
+ + +D +TG +G+ V +E ++A A ++ ++ G+ ++VD+ + T
Sbjct: 84 IHLNLDRRTGFLKGYALVEYETQKEANEAIDQSNDTDLLGQNVKVDWCFVKGKKT 138
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 516 QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
+++ D +G S+GF F+ F E + A G + R I V Y+
Sbjct: 141 KIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 187
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +3
Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRA 671
RG+ +V ++++EDA+ + G +IDG + V+ +I +++
Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQS 215
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570
E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570
E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T
Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570
E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T
Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 123
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570
E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 409 ENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFASFT 570
E+ ++ L V G+ TE + F+KYG V K ++ L + P GF T
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
T +V++D + GRS+GF FV FE E+A A + I + + V
Sbjct: 368 TITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 540 GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
G S+G+ FV+FE A+ A + GM + +++ V
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
T +V++D + GRS+GF FV FE E+A A + I + + V
Sbjct: 368 TITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYV 415
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 540 GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
G S+G+ FV+FE A+ A + GM + +++ V
Sbjct: 182 GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
GF FV FED DA+ A ++ G ++G +R+
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
GF FV FED DA+ A ++ G ++G +R+
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 552 GFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 647
GF FV FED DA+ A ++ G ++G +R+
Sbjct: 36 GFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 513 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQRAH 674
V++V D TG+ +GF FV F+ +A + T ++++ R +R+ + ++ H
Sbjct: 276 VRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMET-IKMEKRDLRIT-KVMKKGH 327
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 522 VIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
V+ + GRS+GF FV FE E+A A E + + + V +I QR
Sbjct: 288 VMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYV--AIAQR 334
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 501 TRCKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSITQR 668
T C+V V G+S+GF FV F + E+A+ A I+G +++ Q+
Sbjct: 180 TSCEVMTV----EGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQK 231
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 427 RCLGVFGLSLYTTEQQINHIFSKYGPV 507
R L + GLS TT++Q+ + FS++GPV
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPV 75
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 427 RCLGVFGLSLYTTEQQINHIFSKYGPV 507
R L + GLS TT++Q+ + FS++GPV
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPV 95
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 427 RCLGVFGLSLYTTEQQINHIFSKYGPV 507
R L + GLS TT++Q+ + FS++GPV
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPV 96
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYS 656
++ + D TG +GF FV FE +DA A E + + ++V+++
Sbjct: 204 RIFIARDKVTGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEWT 252
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 382 HLGDRVRLLENTTPSRCLGVFGLSLYTTEQQINHIFSKYGPVAKCKL*LMQRRAVPEGFA 561
H+ + + LLEN S+C F + T+ I H+ KY + + + ++Q + + A
Sbjct: 23 HMDNIISLLENAAASKCKFAFVI----TDDSITHLHKKYKALEQKSMMVIQDMKISK--A 76
Query: 562 SFTLRTWKMLRLQR-MNAPEWKL 627
+ ++ K L L+ +N KL
Sbjct: 77 NSVVKDGKRLTLENVINKTNMKL 99
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSI 659
+GF F+ + A+ AK G I GR++RV +++
Sbjct: 150 KGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAV 186
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 549 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDYSI 659
+GF F+ + A+ AK G I GR++RV +++
Sbjct: 150 KGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAV 186
>AC084154-12|AAK29876.1| 1137|Caenorhabditis elegans Hypothetical
protein Y22D7AR.12 protein.
Length = 1137
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 510 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNE 608
K V++ GRSR CF Y E + +AKN+
Sbjct: 982 KTPVIVHCYDGRSRSACFAYME-LACQMVAKND 1013
>Z81056-2|CAB02901.2| 323|Caenorhabditis elegans Hypothetical
protein F09F3.2 protein.
Length = 323
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 602 LCNLSIFHVLKVNEAKPSGTARLC 531
+CNL +F+ +KPSG +LC
Sbjct: 33 ICNLYLFYKFVTRASKPSGFQKLC 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,726,801
Number of Sequences: 27780
Number of extensions: 326449
Number of successful extensions: 994
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -