BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30259 (302 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 25 0.23 EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 0.93 AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 2.1 AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 2.8 EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 20 6.6 AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 20 6.6 AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 20 6.6 >EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant protein. Length = 516 Score = 24.6 bits (51), Expect = 0.23 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +2 Query: 68 HREGLPWHLPSARCLHPKGESVEEAPFRDLEVDG 169 HRE + W + + R ++ +GES + +R L +G Sbjct: 290 HREDVRWVMIALRQMYDRGESKGSSCYRLLSRNG 323 Score = 20.2 bits (40), Expect = 5.0 Identities = 5/12 (41%), Positives = 11/12 (91%) Frame = -1 Query: 269 YLIKHLLNGRLV 234 Y+ +HL++GR++ Sbjct: 252 YVTRHLIDGRII 263 >EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase 1 protein. Length = 534 Score = 22.6 bits (46), Expect = 0.93 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = -3 Query: 129 LSPFGCKHRAEGRCHGRPSRCP 64 L P+ R RCHG CP Sbjct: 336 LWPYTMYFRMPHRCHGNLQSCP 357 >AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neuroblasts defectiveprotein protein. Length = 224 Score = 21.4 bits (43), Expect = 2.1 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +3 Query: 111 CIRKVKVLKRPRFEISKLME 170 C+R KRP+FE S E Sbjct: 192 CLRTCSSAKRPKFENSSCDE 211 >AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor candidate 57 protein. Length = 387 Score = 21.0 bits (42), Expect = 2.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 213 KSERQEGYEPPVQEVFN 263 KS +GYE QE+FN Sbjct: 90 KSFFNQGYELSKQEIFN 106 >EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxylase protein. Length = 532 Score = 19.8 bits (39), Expect = 6.6 Identities = 5/11 (45%), Positives = 7/11 (63%) Frame = +2 Query: 83 PWHLPSARCLH 115 P+H P C+H Sbjct: 350 PYHTPEPDCIH 360 >AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein protein. Length = 287 Score = 19.8 bits (39), Expect = 6.6 Identities = 5/18 (27%), Positives = 12/18 (66%) Frame = -3 Query: 78 PSRCPWQWSQESTCSPPP 25 P+R P++W ++++ P Sbjct: 119 PARSPYEWIKKTSYQSQP 136 >AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein protein. Length = 249 Score = 19.8 bits (39), Expect = 6.6 Identities = 5/18 (27%), Positives = 12/18 (66%) Frame = -3 Query: 78 PSRCPWQWSQESTCSPPP 25 P+R P++W ++++ P Sbjct: 119 PARSPYEWIKKTSYQSQP 136 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 54,761 Number of Sequences: 336 Number of extensions: 896 Number of successful extensions: 8 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 122,585 effective HSP length: 49 effective length of database: 106,121 effective search space used: 5412171 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 38 (20.3 bits)
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