BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30259 (302 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 100 4e-22 AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 100 4e-22 AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 100 4e-22 AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 100 4e-22 Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 88 2e-18 AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p pro... 27 3.4 AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA... 27 3.4 BT023139-1|AAY55555.1| 359|Drosophila melanogaster IP10845p pro... 26 8.0 >AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal protein S3a protein. Length = 268 Score = 100 bits (239), Expect = 4e-22 Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 5/89 (5%) Frame = +3 Query: 3 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXX 182 +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH Sbjct: 178 EVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237 Query: 183 XXXXXXXXXDKSE-----RQEGYEPPVQE 254 SE R EGYEPPVQE Sbjct: 238 GGGKSVEAVVSSEGAVIDRPEGYEPPVQE 266 >AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, isoform D protein. Length = 163 Score = 100 bits (239), Expect = 4e-22 Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 5/89 (5%) Frame = +3 Query: 3 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXX 182 +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH Sbjct: 73 EVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 132 Query: 183 XXXXXXXXXDKSE-----RQEGYEPPVQE 254 SE R EGYEPPVQE Sbjct: 133 GGGKSVEAVVSSEGAVIDRPEGYEPPVQE 161 >AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, isoform B protein. Length = 218 Score = 100 bits (239), Expect = 4e-22 Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 5/89 (5%) Frame = +3 Query: 3 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXX 182 +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH Sbjct: 128 EVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 187 Query: 183 XXXXXXXXXDKSE-----RQEGYEPPVQE 254 SE R EGYEPPVQE Sbjct: 188 GGGKSVEAVVSSEGAVIDRPEGYEPPVQE 216 >AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, isoform A protein. Length = 268 Score = 100 bits (239), Expect = 4e-22 Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 5/89 (5%) Frame = +3 Query: 3 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXX 182 +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH Sbjct: 178 EVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGD 237 Query: 183 XXXXXXXXXDKSE-----RQEGYEPPVQE 254 SE R EGYEPPVQE Sbjct: 238 GGGKSVEAVVSSEGAVIDRPEGYEPPVQE 266 >Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein S3a protein. Length = 270 Score = 87.8 bits (208), Expect = 2e-18 Identities = 39/58 (67%), Positives = 51/58 (87%) Frame = +3 Query: 3 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 176 +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH Sbjct: 180 EVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 237 >AY051866-1|AAK93290.1| 332|Drosophila melanogaster LD36157p protein. Length = 332 Score = 27.5 bits (58), Expect = 3.4 Identities = 14/54 (25%), Positives = 31/54 (57%) Frame = +3 Query: 9 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 170 T+ + VN++ S+ + +A +G+ +R+ ++ V KRP+ EI +L++ Sbjct: 103 TDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEITVQKRPKNEIDELLK 156 >AE014298-2587|AAF48743.1| 332|Drosophila melanogaster CG8326-PA protein. Length = 332 Score = 27.5 bits (58), Expect = 3.4 Identities = 14/54 (25%), Positives = 31/54 (57%) Frame = +3 Query: 9 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 170 T+ + VN++ S+ + +A +G+ +R+ ++ V KRP+ EI +L++ Sbjct: 103 TDEDYLRRVNRMTNASVREAHYEAKYGVNVIRNPKTGEITVQKRPKNEIDELLK 156 >BT023139-1|AAY55555.1| 359|Drosophila melanogaster IP10845p protein. Length = 359 Score = 26.2 bits (55), Expect = 8.0 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -3 Query: 99 EGRCHGRPSRCPWQWSQESTCSPP 28 EG P+ P+ WS+ ST SPP Sbjct: 282 EGEGAFAPAAPPYPWSEGSTLSPP 305 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,512,781 Number of Sequences: 53049 Number of extensions: 195286 Number of successful extensions: 542 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 526 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 538 length of database: 24,988,368 effective HSP length: 73 effective length of database: 21,115,791 effective search space used: 570126357 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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