Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30257
(717 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 148 1e-34
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 134 2e-30
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 129 8e-29
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 116 4e-25
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 113 5e-24
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 109 5e-23
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 106 5e-22
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 104 2e-21
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 99 5e-20
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 91 3e-17
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 90 4e-17
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 88 2e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 86 9e-16
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 81 4e-14
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 73 9e-12
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 71 3e-11
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 71 4e-11
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 69 2e-10
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 56 9e-07
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 48 3e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 46 7e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 46 0.001
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 46 0.001
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.035
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 40 0.061
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 40 0.061
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 40 0.081
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 39 0.11
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 39 0.11
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 38 0.25
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.57
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 34 3.0
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 34 4.0
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 34 4.0
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 34 4.0
UniRef50_Q4QAD5 Cluster: Putative uncharacterized protein; n=3; ... 33 5.3
UniRef50_A4XWP5 Cluster: Metal dependent phosphohydrolase precur... 33 7.0
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 33 7.0
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 9.3
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.3
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.3
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 33 9.3
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 148 bits (359), Expect = 1e-34
Identities = 66/89 (74%), Positives = 79/89 (88%)
Frame = +2
Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
++FRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++LRVF
Sbjct: 82 RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVF 141
Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERK 517
CIGFT KDS+SQRKTCYAQH+Q++ I K
Sbjct: 142 CIGFTIKDSMSQRKTCYAQHSQIKNIRAK 170
Score = 113 bits (273), Expect = 3e-24
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +3
Query: 69 IVDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 248
+VDPFTRKDWYDVKAP++F RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80
Query: 249 ER 254
ER
Sbjct: 81 ER 82
Score = 104 bits (250), Expect = 2e-21
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = +1
Query: 490 HSGQSN-RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 666
HS N R KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKV
Sbjct: 161 HSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKV 220
Query: 667 LKRPRFEISKLMELHGE 717
LK+PRF++S LMELHG+
Sbjct: 221 LKKPRFDLSSLMELHGD 237
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 134 bits (324), Expect = 2e-30
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = +2
Query: 254 AFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 433
AFRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC
Sbjct: 80 AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFC 139
Query: 434 IGFTNKDSLSQRKTCYAQHTQVRAIERKCVK 526
+GFT K + RKT YAQH QVR I +K ++
Sbjct: 140 VGFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 113 bits (272), Expect = 4e-24
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 688 ISKLMELHGE 717
+ KLMELHGE
Sbjct: 225 LGKLMELHGE 234
Score = 100 bits (239), Expect = 4e-20
Identities = 46/62 (74%), Positives = 54/62 (87%)
Frame = +3
Query: 69 IVDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 248
+VDPF++KDWYDVKAP++F+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVA 80
Query: 249 ER 254
R
Sbjct: 81 FR 82
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 129 bits (311), Expect = 8e-29
Identities = 60/89 (67%), Positives = 70/89 (78%)
Frame = +2
Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
+A+RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y LR+F
Sbjct: 474 QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF 533
Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERK 517
CI FT K +KTCYAQ +Q+R I RK
Sbjct: 534 CIAFTKKRVNQNKKTCYAQSSQIRQIRRK 562
Score = 101 bits (241), Expect = 2e-20
Identities = 46/57 (80%), Positives = 50/57 (87%)
Frame = +3
Query: 75 DPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245
DPF +KDWYD+KAPSVF R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD D
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADED 473
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/70 (55%), Positives = 56/70 (80%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
R+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F+
Sbjct: 560 RRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFD 619
Query: 688 ISKLMELHGE 717
+ KLME+HG+
Sbjct: 620 LGKLMEVHGD 629
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 116 bits (280), Expect = 4e-25
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = +2
Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
+ FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY LRVF
Sbjct: 78 QVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVF 137
Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERKCVKSLHAT 541
I FT K ++KT YA+ ++V+AI +K V L T
Sbjct: 138 AICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/60 (66%), Positives = 49/60 (81%), Gaps = 4/60 (6%)
Frame = +3
Query: 72 VDPFTRKDWYDVKAPSVFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 239
VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++ D
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD 75
Score = 47.2 bits (107), Expect = 4e-04
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 14/82 (17%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSI--------------AKDIEKACHGIYPLRDV 645
RKKM +I+T V++++L+ VV+ LI S+ A+ I I+P+ +V
Sbjct: 164 RKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNV 223
Query: 646 CIRKVKVLKRPRFEISKLMELH 711
IRKVKVLK P+ + +KL EL+
Sbjct: 224 FIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 113 bits (271), Expect = 5e-24
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
RKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 112 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFE 171
Query: 688 ISKLMELHGE 717
+ KLMELHGE
Sbjct: 172 LGKLMELHGE 181
Score = 86.2 bits (204), Expect = 7e-16
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +3
Query: 69 IVDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 248
+VDPF++KDWYDV AP++F+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D A
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQNDEVA 77
Query: 249 ER 254
R
Sbjct: 78 FR 79
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +2
Query: 254 AFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 409
AFRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 77 AFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 109 bits (263), Expect = 5e-23
Identities = 51/99 (51%), Positives = 69/99 (69%)
Frame = +2
Query: 254 AFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 433
AFRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+LR+F
Sbjct: 80 AFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFA 139
Query: 434 IGFTNKDSLSQRKTCYAQHTQVRAIERKCVKSLHATSLT 550
I T + +KT YA +Q+RAI RK + + + T
Sbjct: 140 IAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREAST 178
Score = 85.8 bits (203), Expect = 9e-16
Identities = 38/70 (54%), Positives = 55/70 (78%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
R+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F+
Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFD 224
Query: 688 ISKLMELHGE 717
+ L+ LHGE
Sbjct: 225 LGGLLALHGE 234
Score = 85.4 bits (202), Expect = 1e-15
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +3
Query: 75 DPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245
DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D D
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDED 78
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 106 bits (255), Expect = 5e-22
Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Frame = +2
Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
KA+RK +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++RVF
Sbjct: 82 KAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVF 141
Query: 431 CIGFTNKDSL---SQRKTCYAQHTQVRAIERK 517
+ FT K S S TCYA+ +QVRAI RK
Sbjct: 142 TLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRK 173
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +3
Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245
+DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ +++
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLKDNSN 80
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
R+K+ IT + + E LI + K IEK I+PL+++ IRKVKVLKRP+ +
Sbjct: 171 RRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRPKLD 230
Query: 688 ISKLMELH 711
+K+ EL+
Sbjct: 231 ATKIAELY 238
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 104 bits (250), Expect = 2e-21
Identities = 51/90 (56%), Positives = 63/90 (70%)
Frame = +2
Query: 257 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 436
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 437 GFTNKDSLSQRKTCYAQHTQVRAIERKCVK 526
FT K Q+ YAQ T+++ + + V+
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 72.5 bits (170), Expect = 9e-12
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
R ++ E++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ +
Sbjct: 90 RAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLD 149
Query: 688 ISKLMELHGE 717
+ +++ELH E
Sbjct: 150 LGRILELHSE 159
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 99 bits (238), Expect = 5e-20
Identities = 46/89 (51%), Positives = 66/89 (74%)
Frame = +2
Query: 266 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 445
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 446 NKDSLSQRKTCYAQHTQVRAIERKCVKSL 532
++ S +KT YA+ Q++ I RK + +L
Sbjct: 146 SRKSNQIKKTSYAKSAQIKKI-RKIMNNL 173
Score = 75.4 bits (177), Expect = 1e-12
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3
Query: 69 IVDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 230
I +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADL 75
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 91.1 bits (216), Expect = 3e-17
Identities = 37/94 (39%), Positives = 60/94 (63%)
Frame = +2
Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
+A+RK R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R+F
Sbjct: 82 EAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLF 141
Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERKCVKSL 532
+ FT + Q + CYA+ V+ + + K +
Sbjct: 142 VVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMI 175
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = +3
Query: 75 DPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 251
+ RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL E
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEE 81
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/69 (30%), Positives = 45/69 (65%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+
Sbjct: 168 RMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFD 227
Query: 688 ISKLMELHG 714
L+ HG
Sbjct: 228 AQALLSAHG 236
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 90.2 bits (214), Expect = 4e-17
Identities = 41/91 (45%), Positives = 61/91 (67%)
Frame = +2
Query: 254 AFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 433
A+RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+LR+F
Sbjct: 79 AWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFV 138
Query: 434 IGFTNKDSLSQRKTCYAQHTQVRAIERKCVK 526
I FT QRKT YAQ +Q++ I +K V+
Sbjct: 139 IAFTKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +3
Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245
+DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +D
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQSD 76
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/70 (35%), Positives = 48/70 (68%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
RKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ +
Sbjct: 164 RKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVD 223
Query: 688 ISKLMELHGE 717
KL E + +
Sbjct: 224 AQKLREFYDD 233
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +3
Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 251
VD ++KDWYD+KAP++F+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D A
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQNDEVAF 81
Query: 252 R 254
R
Sbjct: 82 R 82
Score = 37.5 bits (83), Expect = 0.33
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 254 AFRKFRLIAEYVQGRNVLCNFHGMDLTTD 340
AFRKF+LI E VQG+ L NF M L+ D
Sbjct: 80 AFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 85.8 bits (203), Expect = 9e-16
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +1
Query: 571 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 717
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGD 49
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 80.6 bits (190), Expect = 4e-14
Identities = 32/58 (55%), Positives = 47/58 (81%)
Frame = +1
Query: 538 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 711
D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 158 DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELH 215
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 439
RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G
Sbjct: 67 RKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVG 125
Query: 440 F-TNKDSLSQRKTCYAQHTQVRAI 508
+ TN + R+ AQ+ QV I
Sbjct: 126 YTTNVTTRYARQLVCAQYQQVHQI 149
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +3
Query: 87 RKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 239
+KD YDVKA ++F+ R +G T V R Q TK+ S GL G VFE SLA LQ D
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQND 62
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/85 (41%), Positives = 50/85 (58%)
Frame = +2
Query: 260 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 439
RKF ++G + F GM+LT+DK + M+KKW TLIEA D+ DG V RVF +G
Sbjct: 34 RKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMG 93
Query: 440 FTNKDSLSQRKTCYAQHTQVRAIER 514
T + +KTCY +H+ + I +
Sbjct: 94 VTRRHPGYVKKTCYVKHSDEKKIRK 118
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/62 (32%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 490 HSGQSN-RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 666
HS + RK M ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK
Sbjct: 110 HSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKT 169
Query: 667 LK 672
+K
Sbjct: 170 IK 171
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 293 GRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 472
G V F GM LT DKL +++K++T+I+A++D KT DG++LR+F IGFT K + S +
Sbjct: 89 GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKN 148
Query: 473 TCYAQHTQVRAIERKCVKSL 532
YA + R + +K+L
Sbjct: 149 HTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/91 (37%), Positives = 51/91 (56%)
Frame = +2
Query: 263 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 442
KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+LRVF I F
Sbjct: 83 KFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAF 142
Query: 443 TNKDSLSQRKTCYAQHTQVRAIERKCVKSLH 535
T++ +RK C+ + +R + ++LH
Sbjct: 143 TDRFRFQRRKNCHVKGRVIRMMRAGIYETLH 173
Score = 59.3 bits (137), Expect = 9e-08
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +3
Query: 75 DPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 254
DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL + AE
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDL--NPGAED 77
Query: 255 LSANS 269
L+ N+
Sbjct: 78 LNGNT 82
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
R + E + ++ + +V KL + + +A I RDV IR+VKV+KRPR
Sbjct: 165 RAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNT 224
Query: 688 ISKLMELH 711
+ L +H
Sbjct: 225 MELLSTMH 232
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +2
Query: 314 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 493
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + KT Y +
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSS 155
Query: 494 QVRAIERK 517
Q RA+ R+
Sbjct: 156 QKRALRRR 163
Score = 39.9 bits (89), Expect = 0.061
Identities = 16/55 (29%), Positives = 36/55 (65%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 672
R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 161 RRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/81 (37%), Positives = 49/81 (60%)
Frame = -2
Query: 245 VSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHRRSLDIVPIFASEWVDNL 66
+ + L ISQGN ++S L+ FR + S + +K A++ AE RR L+++P+ S+ V L
Sbjct: 76 ILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDRRRLNVIPVLLSKRVGCL 135
Query: 65 LLNTFFTALRQAFIFPDRHVQ 3
LL++ F L +FPD H +
Sbjct: 136 LLSSLF-PLGNPLVFPDDHCE 155
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/102 (28%), Positives = 54/102 (52%)
Frame = +2
Query: 263 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 442
K + V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 443 TNKDSLSQRKTCYAQHTQVRAIERKCVKSLHATSLTLNSGRW 568
T + +K+ A+ +K +++L + L+SG++
Sbjct: 134 TTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQF 166
Score = 36.7 bits (81), Expect = 0.57
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 678
RKKM E + + + + + +++ ++A D+ I P+R V I K+KVLK P
Sbjct: 147 RKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/50 (46%), Positives = 35/50 (70%)
Frame = +2
Query: 320 GMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 469
G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K + S +
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKRARSSQ 133
Score = 33.5 bits (73), Expect = 5.3
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 457 LEPTQDVLRPAHSGQSN--RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 630
++PT ++ A S Q R+ M +I+ + + ++ + + I ++ I + IY
Sbjct: 119 VKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIY 178
Query: 631 PLRDVCIRKVKVLKRP 678
PLR V IRK +V P
Sbjct: 179 PLRRVEIRKTQVEAMP 194
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = +1
Query: 637 RDVCIRKVKVLKRPRFEISKLMELHGE 717
R +C++KVK+LK+P+FE+ KLMELHG+
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGD 89
Score = 39.9 bits (89), Expect = 0.061
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +3
Query: 69 IVDPFTRKDWYDVKAPSVFSKRQVGTT 149
++D F++KDWYDVKA ++F+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 287 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 466
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV + ++ S
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSS 136
Query: 467 RKT 475
KT
Sbjct: 137 IKT 139
Score = 39.5 bits (88), Expect = 0.081
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
RKK+ E +T E V +I D +++ K IYP+R + IRK +VL P +
Sbjct: 142 RKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEK 201
Query: 688 ISKLM 702
I +L+
Sbjct: 202 IVELV 206
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 40.7 bits (91), Expect = 0.035
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 281 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 451
E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +RV I T K
Sbjct: 70 EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK 126
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 239
VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGD 57
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 39.9 bits (89), Expect = 0.061
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = +2
Query: 326 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 505
+LT D LR +V++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 506 IERKCVKSLHATS 544
I R + +HA +
Sbjct: 134 IRRVMIDKVHAAA 146
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 39.9 bits (89), Expect = 0.061
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +2
Query: 164 PGNE--NCFGRIEGKSFRSFPG*STS*H*RGKAFRKFRLIAEYVQGRNVLCNFHGMDLTT 337
P N+ N GRI S R T+ H K + + V G N F G D T
Sbjct: 42 PANDPANLIGRISEISLRDL----TNEH--SKHMTRMYFKVDGVSGNNATSQFVGHDTTR 95
Query: 338 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 475
+ L+ V++ ++ I A ++V+T DG+ +RV + T + KT
Sbjct: 96 EYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 39.5 bits (88), Expect = 0.081
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 287 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 451
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT +
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTR 120
Score = 35.9 bits (79), Expect = 1.00
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVCIRKVKVLKR 675
RK+M ++I + + E + + + +SI + I++A IYP+R IRK +VL+
Sbjct: 131 RKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEE 190
Query: 676 P 678
P
Sbjct: 191 P 191
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 39.1 bits (87), Expect = 0.11
Identities = 29/94 (30%), Positives = 50/94 (53%)
Frame = +2
Query: 170 NENCFGRIEGKSFRSFPG*STS*H*RGKAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 349
+E+ GRI + + F G T H +FR ++E V G++ L F G T+ +R
Sbjct: 51 DEHIIGRIYEMTQQEFNGDFTKMH----VMLRFR-VSETV-GQDALTTFVGHHHQTNHIR 104
Query: 350 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 451
+++++ I+ IDV T DGY++R+ + T K
Sbjct: 105 RQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 39.1 bits (87), Expect = 0.11
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 287 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 466
V G N F +LT + L + ++ + IE +DV T DGY LRV + FT
Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT------V 129
Query: 467 RKTCYAQHTQVRAIERKCV 523
R+ +Q +RAI R+ V
Sbjct: 130 RRCKTSQKRAIRAIMRQIV 148
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 37.9 bits (84), Expect = 0.25
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 287 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 466
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 467 RKTCYAQHTQVRAIERKCVKS 529
+K+ + Q +E+K +S
Sbjct: 130 QKSAIRKVMQ-EIVEQKARES 149
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.57
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 290 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 445
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 34.3 bits (75), Expect = 3.0
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +2
Query: 314 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT 493
F+G L+ D + MV K L+E +I + T V+ +F + +T +L Y + +
Sbjct: 98 FNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRS 156
Query: 494 QVRAIERK---CVKSL 532
++R I R+ C+K +
Sbjct: 157 RIRKINRESILCIKKM 172
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 33.9 bits (74), Expect = 4.0
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
K + K R + V G F G TTD +R M+++ + I+A+ VKT D +++
Sbjct: 62 KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLH 121
Query: 431 CIGFTNKDSLSQRK 472
+ T + + S ++
Sbjct: 122 VLAVTTRRAKSSQQ 135
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 33.9 bits (74), Expect = 4.0
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 681
RK + + + + S+ +V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 143 RKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 326 DLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LSQRK 472
+LT D LR +V++ + +EA I V TTD Y +++ + T K + SQ K
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKKADASQEK 132
>UniRef50_Q4QAD5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 788
Score = 33.5 bits (73), Expect = 5.3
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -3
Query: 355 HPPELIGCEVHAVEVAEHITSLHIFGD*SEFAESLSASVSACRSARETSKTLPFNPSEA 179
H P + CE H +V EH+ + + G+ S +E+L A + RS+ + PS A
Sbjct: 507 HLPSMRACEQHISDVTEHVLNHLVVGEVS--SEALEARIERLRSSTDAGSVPSGRPSGA 563
>UniRef50_A4XWP5 Cluster: Metal dependent phosphohydrolase
precursor; n=3; Pseudomonas|Rep: Metal dependent
phosphohydrolase precursor - Pseudomonas mendocina ymp
Length = 983
Score = 33.1 bits (72), Expect = 7.0
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Frame = +3
Query: 75 DPFTRKDWYD---------VKAPSVF-SKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA 224
DP TR DWY AP VF S +VGTTL R+ T + + +++L
Sbjct: 181 DPRTR-DWYKRARGNGGQITTAPYVFFSTEEVGTTLARRSGLTNVLAA-------DLTLD 232
Query: 225 DLQADTDAERLSANSD 272
DL A A R++ANSD
Sbjct: 233 DLSATLAAHRVTANSD 248
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 33.1 bits (72), Expect = 7.0
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 314 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 472
F + + + LR +V++ + + +DVKT+DGYV R+ + T + + +K
Sbjct: 82 FKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 32.7 bits (71), Expect = 9.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 324 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 449
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 9.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 553 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 705
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 32.7 bits (71), Expect = 9.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 675
R K+ I + L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 138 RSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,472,255
Number of Sequences: 1657284
Number of extensions: 15429025
Number of successful extensions: 45066
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45056
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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