BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30257 (717 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524... 130 1e-30 02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221... 128 3e-30 12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 128 6e-30 11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504,439... 29 3.7 01_07_0009 - 40397276-40397534,40397637-40398745,40398834-403989... 29 4.9 06_03_0290 - 19193707-19193752,19193822-19194090 28 6.4 12_02_0090 + 13493311-13494180 28 8.5 03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 8.5 >03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723, 5243794-5243979,5244075-5244275,5244362-5244460 Length = 262 Score = 130 bits (314), Expect = 1e-30 Identities = 60/92 (65%), Positives = 74/92 (80%) Frame = +2 Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430 +A+RK RL AE VQG+NVL NF GM TTDKLR +VKKWQTLIEA++DVKTTDGY+LR+F Sbjct: 79 QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLF 138 Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERKCVK 526 CIGFT + ++TCYAQ +Q+R I RK V+ Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKMVE 170 Score = 100 bits (240), Expect = 1e-21 Identities = 46/58 (79%), Positives = 51/58 (87%) Frame = +3 Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245 VDPF +KDWYD+KAPSVF+ R +G TLV+RTQGTKIASEGLK RVFEVSLADLQ D D Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 78 Score = 84.2 bits (199), Expect = 9e-17 Identities = 35/70 (50%), Positives = 55/70 (78%) Frame = +1 Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687 R+KM EI+ ++ +L+E+V+K IP+ I K+IEKA I+PL++V +RKVK+LK P+F+ Sbjct: 165 RRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFD 224 Query: 688 ISKLMELHGE 717 + KLME+HG+ Sbjct: 225 LGKLMEVHGD 234 >02_02_0482 - 10819562-10819813,10820773-10820952,10822073-10822150, 10823056-10823256,10823365-10823550,10823646-10823783, 10824396-10824501,10824634-10824692 Length = 399 Score = 128 bits (310), Expect = 3e-30 Identities = 60/92 (65%), Positives = 73/92 (79%) Frame = +2 Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430 +A+RK RL AE VQGRNVL NF GM TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+F Sbjct: 79 QAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLF 138 Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERKCVK 526 CIGFT + ++TCYAQ +Q+R I RK V+ Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKMVE 170 Score = 101 bits (241), Expect = 8e-22 Identities = 46/58 (79%), Positives = 52/58 (89%) Frame = +3 Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245 VDPF++KDWYD+KAP+VFS R +G TLV+RTQGTKIASEGLK RVFEVSLADLQ D D Sbjct: 21 VDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 78 Score = 83.0 bits (196), Expect = 2e-16 Identities = 35/70 (50%), Positives = 54/70 (77%) Frame = +1 Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687 R+KM EI+ + +L+E+V+K IP+ I K+IEK+ I+PL++V IRKVK+LK P+F+ Sbjct: 165 RRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKILKAPKFD 224 Query: 688 ISKLMELHGE 717 + KLME+HG+ Sbjct: 225 LGKLMEVHGD 234 >12_02_0012 - 12309332-12310228,12311087-12311669,12311945-12312051, 12313190-12313237,12315139-12315216,12315300-12315500, 12315612-12315797,12315870-12316007,12318311-12318416, 12318529-12318587 Length = 800 Score = 128 bits (308), Expect = 6e-30 Identities = 59/92 (64%), Positives = 73/92 (79%) Frame = +2 Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430 +A+RK RL AE VQG+NVL NF GM TTDKLR +VKKWQTLIEA++DVKTTD Y+LR+F Sbjct: 79 QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLF 138 Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERKCVK 526 CIGFT + ++TCYAQ +Q+R I RK V+ Sbjct: 139 CIGFTKRRPNQVKRTCYAQASQIRQIRRKMVE 170 Score = 101 bits (241), Expect = 8e-22 Identities = 47/58 (81%), Positives = 51/58 (87%) Frame = +3 Query: 72 VDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 245 VDPF +KDWYD+KAPSVF+ R VG TLV+RTQGTKIASEGLK RVFEVSLADLQ D D Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 78 Score = 84.2 bits (199), Expect = 9e-17 Identities = 35/70 (50%), Positives = 55/70 (78%) Frame = +1 Query: 508 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 687 R+KM EI+ ++ +L+E+V+K IP+ I K+IEKA I+PL++V +RKVK+LK P+F+ Sbjct: 165 RRKMVEIMVNQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFD 224 Query: 688 ISKLMELHGE 717 + KLME+HG+ Sbjct: 225 LGKLMEVHGD 234 >11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504, 4398608-4398709 Length = 309 Score = 29.1 bits (62), Expect = 3.7 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 562 EVVNKLIPDSIAKDIEKACHGIYPLRD 642 ++VN IPD + + ++K C IY LR+ Sbjct: 34 QLVNTGIPDDLLERVKKVCSDIYKLRE 60 >01_07_0009 - 40397276-40397534,40397637-40398745,40398834-40398932, 40399043-40399272,40399534-40399585,40399679-40399865, 40399987-40400193,40400283-40400449,40400804-40401094, 40401166-40401636 Length = 1023 Score = 28.7 bits (61), Expect = 4.9 Identities = 18/85 (21%), Positives = 33/85 (38%) Frame = -3 Query: 409 IGCLHINVGFDESLPFFNHPPELIGCEVHAVEVAEHITSLHIFGD*SEFAESLSASVSAC 230 + CL + G + +P C ++ + LH FA S S+S Sbjct: 586 MSCLEVETGIQNTNTLSGYPVANRRCSWESIRLFNR--ELH--SSEKSFAPIASDSISLV 641 Query: 229 RSARETSKTLPFNPSEAIFVPWVRL 155 S +T +PF +F P++++ Sbjct: 642 ISVEDTGVGIPFEAQSRVFTPFMQV 666 >06_03_0290 - 19193707-19193752,19193822-19194090 Length = 104 Score = 28.3 bits (60), Expect = 6.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 306 SATSTAWTSQPISSGGWLKNGRLSSKPTLM 395 +A S A T P S GW+ G S+ P+L+ Sbjct: 67 AAGSAARTRSPSQSNGWITGGSASAMPSLV 96 >12_02_0090 + 13493311-13494180 Length = 289 Score = 27.9 bits (59), Expect = 8.5 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 500 RAIERKCVKSLHATSLTLNSGRW*TS*FLTPLPRTSRRPA 619 RA ERK ++LH + TL + TP+P T+RRP+ Sbjct: 44 RAAERKKRRALHQAARTLAPAHKQAA---TPIPATTRRPS 80 >03_05_0791 + 27736978-27737217,27737648-27739191,27739512-27739763, 27739844-27739954,27740042-27740102,27740373-27740558 Length = 797 Score = 27.9 bits (59), Expect = 8.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 215 NFENSSLQSFRSNFRSLGTVDKRGADLPLAE 123 +FENS LQSF +L + K+G P E Sbjct: 216 SFENSELQSFTDKIENLSSSQKKGYFKPKRE 246 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,463,140 Number of Sequences: 37544 Number of extensions: 449897 Number of successful extensions: 1261 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1261 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1862792824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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