Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30257
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   146   6e-37
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.58 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   5.4  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    23   7.2  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   7.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.2  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  146 bits (354), Expect = 6e-37
 Identities = 65/89 (73%), Positives = 78/89 (87%)
 Frame = +2

Query: 251 KAFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 430
           ++FRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVKTTDG++LRVF
Sbjct: 82  RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVF 141

Query: 431 CIGFTNKDSLSQRKTCYAQHTQVRAIERK 517
           CIGFT KDS+SQRKTCYAQH+Q++ I  K
Sbjct: 142 CIGFTIKDSMSQRKTCYAQHSQIKNIRAK 170



 Score =  111 bits (267), Expect = 2e-26
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 69  IVDPFTRKDWYDVKAPSVFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 248
           +VDPFTRKDWYDVKAP++F  RQ G TLVNRTQGTKIAS+GLKGRVFEVSLADLQ + DA
Sbjct: 21  VVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDA 80

Query: 249 ER 254
           ER
Sbjct: 81  ER 82



 Score =  104 bits (250), Expect = 2e-24
 Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +1

Query: 490 HSGQSN-RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 666
           HS   N R KM  II R++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRKVKV
Sbjct: 161 HSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKV 220

Query: 667 LKRPRFEISKLMELHGE 717
           LK+PRF++S LMELHG+
Sbjct: 221 LKKPRFDLSSLMELHGD 237


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 627 LPSARCLHPKGESVEEAPFRDLEVDGTS 710
           +P   C H  G ++E+A    LE DGT+
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGTA 584


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -1

Query: 657 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 571
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 496 GQSNRKKMCEIITRDVTNSELRE 564
           G   + K+  +IT+D+   ELRE
Sbjct: 102 GFPEKHKVLHVITKDIREHELRE 124


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
 Frame = -3

Query: 415  VSIGCLHINVGFD-------ESLPFFNHPPELIGCEVHAVEVAEH--ITSLHIFGD*SEF 263
            +S+  L +  GFD       +++ F +  P  +       ++  H  ++SLH  G     
Sbjct: 811  LSVAILRVGKGFDYSQVLGEDTVKFISEYPRTLVANDSTNDLLSHNKVSSLH--GS---- 864

Query: 262  AESLSASVSACRSARETSKTLPFNP 188
             +SLS +VS   S  + SKT+   P
Sbjct: 865  CDSLSRNVSQASSTSDLSKTISVAP 889


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -3

Query: 682 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 566
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,611
Number of Sequences: 2352
Number of extensions: 16696
Number of successful extensions: 47
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)