BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30254
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 107 4e-23
BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2 (met... 107 4e-23
AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens ... 107 4e-23
AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens ... 107 4e-23
AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptid... 107 4e-23
AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein. 107 4e-23
AK001983-1|BAA92018.1| 170|Homo sapiens protein ( Homo sapiens ... 106 9e-23
BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1... 80 9e-15
BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1... 80 9e-15
BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1... 80 9e-15
AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein. 80 9e-15
AK131263-1|BAD18441.1| 171|Homo sapiens protein ( Homo sapiens ... 80 9e-15
AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate carboxypeptid... 80 9e-15
U13658-1|AAA79867.1| 475|Homo sapiens RO52 protein. 34 0.57
U01882-1|AAB87094.1| 475|Homo sapiens 52 kda component of SS-A/... 34 0.57
M62800-1|AAA36651.1| 475|Homo sapiens 52-kD SS-A/Ro autoantigen... 34 0.57
M34551-1|AAA36581.1| 475|Homo sapiens protein ( Human 52-kD rib... 34 0.57
BC010861-1|AAH10861.1| 475|Homo sapiens tripartite motif-contai... 34 0.57
AY742713-1|AAU89982.1| 475|Homo sapiens Sjogren syndrome antige... 34 0.57
AF391283-1|AAK76432.1| 475|Homo sapiens SSA1 protein. 34 0.57
AL160171-4|CAI12931.1| 424|Homo sapiens chromosome 1 open readi... 32 2.3
>BC003176-1|AAH03176.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 107 bits (257), Expect = 4e-23
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA K ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 370 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATG 429
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 430 KNVMLLPVGSADDGAHSQNEKLN 452
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 453 RYNYIEGTKMLAAYLYEVSQL 473
>BC001375-1|AAH01375.1| 475|Homo sapiens CNDP dipeptidase 2
(metallopeptidase M20 family) protein.
Length = 475
Score = 107 bits (257), Expect = 4e-23
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA K ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 370 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATG 429
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 430 KNVMLLPVGSADDGAHSQNEKLN 452
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 453 RYNYIEGTKMLAAYLYEVSQL 473
>AK001692-1|BAA91840.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ10830 fis, clone NT2RP4001143, weakly similar to
SUCCINYL-DIAMINOPIMELATE DESUCCINYLASE (EC 3.5.1.18). ).
Length = 475
Score = 107 bits (257), Expect = 4e-23
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA K ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 370 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATG 429
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 430 KNVMLLPVGSADDGAHSQNEKLN 452
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 453 RYNYIEGTKMLAAYLYEVSQL 473
>AK001262-1|BAA91587.1| 311|Homo sapiens protein ( Homo sapiens
cDNA FLJ10400 fis, clone NT2RM4000395. ).
Length = 311
Score = 107 bits (257), Expect = 4e-23
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA K ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 206 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATG 265
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 266 KNVMLLPVGSADDGAHSQNEKLN 288
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 289 RYNYIEGTKMLAAYLYEVSQL 309
>AJ347717-1|CAC69883.1| 475|Homo sapiens glutamate carboxypeptidase
protein.
Length = 475
Score = 107 bits (257), Expect = 4e-23
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA K ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 370 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATG 429
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 430 KNVMLLPVGSADDGAHSQNEKLN 452
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 453 RYNYIEGTKMLAAYLYEVSQL 473
>AF258592-1|AAG23795.1| 391|Homo sapiens PP856 protein.
Length = 391
Score = 107 bits (257), Expect = 4e-23
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA K ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 286 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMKTVFGVEPDLTREGGSIPVTLTFQEATG 345
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 346 KNVMLLPVGSADDGAHSQNEKLN 368
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 369 RYNYIEGTKMLAAYLYEVSQL 389
>AK001983-1|BAA92018.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ11121 fis, clone PLACE1006139. ).
Length = 170
Score = 106 bits (254), Expect = 9e-23
Identities = 45/83 (54%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSI-TAQSGRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
SPN+ + G+ W + HPHY A RA + ++ +PD++REGGSIPVT+T QEA+G
Sbjct: 65 SPNEFKVYMGHGGKPWVSDFSHPHYLAGRRAMRTVFGVEPDLTREGGSIPVTLTFQEATG 124
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
KNV+LLP+G+ DD AHSQNEK+N
Sbjct: 125 KNVMLLPVGSADDGAHSQNEKLN 147
Score = 33.5 bits (73), Expect = 0.76
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG K+ AAYL+EV +L
Sbjct: 148 RYNYIEGTKMLAAYLYEVSQL 168
>BC117122-1|AAI17123.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 79.8 bits (188), Expect = 9e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSITAQSG-RAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
S NKM ++ G W N D Y AA RA + ++ T+PDM R+G +IP+ QE
Sbjct: 404 SSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVH 463
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
K+V+L+P+GA DD HSQNEKIN
Sbjct: 464 KSVVLIPLGAVDDGEHSQNEKIN 486
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG KLFAA+ E+ +L
Sbjct: 487 RWNYIEGTKLFAAFFLEMAQL 507
>BC113512-1|AAI13513.1| 507|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 507
Score = 79.8 bits (188), Expect = 9e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSITAQSG-RAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
S NKM ++ G W N D Y AA RA + ++ T+PDM R+G +IP+ QE
Sbjct: 403 SSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVH 462
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
K+V+L+P+GA DD HSQNEKIN
Sbjct: 463 KSVVLIPLGAVDDGEHSQNEKIN 485
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG KLFAA+ E+ +L
Sbjct: 486 RWNYIEGTKLFAAFFLEMAQL 506
>BC110295-1|AAI10296.1| 508|Homo sapiens carnosine dipeptidase 1
(metallopeptidase M20 family) protein.
Length = 508
Score = 79.8 bits (188), Expect = 9e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSITAQSG-RAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
S NKM ++ G W N D Y AA RA + ++ T+PDM R+G +IP+ QE
Sbjct: 404 SSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVH 463
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
K+V+L+P+GA DD HSQNEKIN
Sbjct: 464 KSVVLIPLGAVDDGEHSQNEKIN 486
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG KLFAA+ E+ +L
Sbjct: 487 RWNYIEGTKLFAAFFLEMAQL 507
>AY358756-1|AAQ89116.1| 507|Homo sapiens DPKL1915 protein.
Length = 507
Score = 79.8 bits (188), Expect = 9e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSITAQSG-RAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
S NKM ++ G W N D Y AA RA + ++ T+PDM R+G +IP+ QE
Sbjct: 403 SSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVH 462
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
K+V+L+P+GA DD HSQNEKIN
Sbjct: 463 KSVVLIPLGAVDDGEHSQNEKIN 485
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG KLFAA+ E+ +L
Sbjct: 486 RWNYIEGTKLFAAFFLEMAQL 506
>AK131263-1|BAD18441.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ16195 fis, clone BRTHA3000296. ).
Length = 171
Score = 79.8 bits (188), Expect = 9e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSITAQSG-RAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
S NKM ++ G W N D Y AA RA + ++ T+PDM R+G +IP+ QE
Sbjct: 65 SSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVH 124
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
K+V+L+P+GA DD HSQNEKIN
Sbjct: 125 KSVVLIPLGAVDDGEHSQNEKIN 147
>AJ417564-1|CAD10388.1| 508|Homo sapiens glutamate
carboxypeptidase-like protein 2 protein.
Length = 508
Score = 79.8 bits (188), Expect = 9e-15
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 SPNKMSITAQSG-RAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASG 182
S NKM ++ G W N D Y AA RA + ++ T+PDM R+G +IP+ QE
Sbjct: 404 SSNKMVVSMTLGLHPWIANIDDTQYLAAKRAIRTVFGTEPDMIRDGSTIPIAKMFQEIVH 463
Query: 183 KNVLLLPMGAGDDMAHSQNEKIN 251
K+V+L+P+GA DD HSQNEKIN
Sbjct: 464 KSVVLIPLGAVDDGEHSQNEKIN 486
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 251 RCNYIEGIKLFAAYLFEVGKL 313
R NYIEG KLFAA+ E+ +L
Sbjct: 487 RWNYIEGTKLFAAFFLEMAQL 507
>U13658-1|AAA79867.1| 475|Homo sapiens RO52 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>U01882-1|AAB87094.1| 475|Homo sapiens 52 kda component of SS-A/Ro
autoantigen protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>M62800-1|AAA36651.1| 475|Homo sapiens 52-kD SS-A/Ro autoantigen
protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>M34551-1|AAA36581.1| 475|Homo sapiens protein ( Human 52-kD
ribonucleoprotein Ro/SSA mRNA, complete cds. ).
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>BC010861-1|AAH10861.1| 475|Homo sapiens tripartite
motif-containing 21 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>AY742713-1|AAU89982.1| 475|Homo sapiens Sjogren syndrome antigen
A1 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>AF391283-1|AAK76432.1| 475|Homo sapiens SSA1 protein.
Length = 475
Score = 33.9 bits (74), Expect = 0.57
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 328 PCLLGEFTDLEQVGGKQFYAFDVVATLIFSFCECAMSSP 212
PC +G F D E G FY +LI+SF ECA + P
Sbjct: 404 PCQVGIFLDYE-AGMVSFYNITDHGSLIYSFSECAFTGP 441
>AL160171-4|CAI12931.1| 424|Homo sapiens chromosome 1 open reading
frame 59 protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.3
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -3
Query: 544 QSYTLPPKIDLPPHDLTVLFPKRGYKIDCGSLFISIYPSPGYERFHKIKSFGKITKTIKT 365
Q T+ P++ L H +L P + +F + YPS ERF K+ ++++ +++
Sbjct: 254 QGLTMLPRLVLNFHPQAILLPHLPKMLRL-QVFTTSYPSLQQERFFKLVLVNEVSQQVES 312
Query: 364 ISYSFYV*HPRRPCLLGEFTDL-EQVGGKQ 278
+ S PRR GE D + +GG +
Sbjct: 313 LRVSHL---PRRKEQAGERGDKPKDIGGSK 339
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,307,230
Number of Sequences: 237096
Number of extensions: 2032084
Number of successful extensions: 8168
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8168
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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