Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30254
         (708 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...   130   2e-30
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...   130   2e-30

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score =  130 bits (313), Expect = 2e-30
 Identities = 57/85 (67%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   GSPNKMSITAQS-GRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEAS 179
           GSPNKM +T  S G+ WTE+P+HPHY+AA RA K ++  +PDM+REGGSIPVT+TLQEA+
Sbjct: 374 GSPNKMKVTMLSAGKPWTEDPNHPHYEAAKRAIKHVFNVEPDMTREGGSIPVTLTLQEAT 433

Query: 180 GKNVLLLPMGAGDDMAHSQNEKINV 254
           GKNV+L+P+GA DD AHSQNEKI++
Sbjct: 434 GKNVILVPVGACDDGAHSQNEKIDI 458



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +2

Query: 257 NYIEGIKLFAAYLFEVGKL 313
           NYIEG KL  AYL EVGKL
Sbjct: 460 NYIEGTKLLGAYLHEVGKL 478


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score =  130 bits (313), Expect = 2e-30
 Identities = 57/85 (67%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   GSPNKMSITAQS-GRAWTENPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEAS 179
           GSPNKM +T  S G+ WTE+P+HPHY+AA RA K ++  +PDM+REGGSIPVT+TLQEA+
Sbjct: 374 GSPNKMKVTMLSAGKPWTEDPNHPHYEAAKRAIKHVFNVEPDMTREGGSIPVTLTLQEAT 433

Query: 180 GKNVLLLPMGAGDDMAHSQNEKINV 254
           GKNV+L+P+GA DD AHSQNEKI++
Sbjct: 434 GKNVILVPVGACDDGAHSQNEKIDI 458



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +2

Query: 257 NYIEGIKLFAAYLFEVGKL 313
           NYIEG KL  AYL EVGKL
Sbjct: 460 NYIEGTKLLGAYLHEVGKL 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,962,456
Number of Sequences: 53049
Number of extensions: 642272
Number of successful extensions: 1532
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)