BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30251 (483 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 125 4e-29 AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 125 4e-29 AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 115 4e-26 >AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC, isoform C protein. Length = 155 Score = 125 bits (301), Expect = 4e-29 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 3/87 (3%) Frame = +3 Query: 3 QTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 173 Q E+AFQKQ V LNRK G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+TG+V Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63 Query: 174 SXRGRILTGVVQKMKMQRTIVIRRDYL 254 RGRILTGVV+K KMQRTIVIRRDYL Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDYL 90 Score = 89.8 bits (213), Expect = 2e-18 Identities = 42/47 (89%), Positives = 43/47 (91%) Frame = +2 Query: 272 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNNLKVS 412 +RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFN LKVS Sbjct: 97 SRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVS 143 >AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA, isoform A protein. Length = 155 Score = 125 bits (301), Expect = 4e-29 Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 3/87 (3%) Frame = +3 Query: 3 QTEKAFQKQATVFLNRK---GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 173 Q E+AFQKQ V LNRK G K+K +R ++VGLGFKTPREAI+GTYIDKKCP+TG+V Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63 Query: 174 SXRGRILTGVVQKMKMQRTIVIRRDYL 254 RGRILTGVV+K KMQRTIVIRRDYL Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDYL 90 Score = 89.8 bits (213), Expect = 2e-18 Identities = 42/47 (89%), Positives = 43/47 (91%) Frame = +2 Query: 272 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNNLKVS 412 +RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFN LKVS Sbjct: 97 SRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVS 143 >AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB, isoform B protein. Length = 154 Score = 115 bits (276), Expect = 4e-26 Identities = 55/85 (64%), Positives = 68/85 (80%), Gaps = 1/85 (1%) Frame = +3 Query: 3 QTEKAFQKQ-ATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSX 179 QTE++F+KQ A V + RK +K R ++ +GLGF+ P EAI+GTYIDKKCP+TG+V Sbjct: 5 QTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRI 64 Query: 180 RGRILTGVVQKMKMQRTIVIRRDYL 254 RGRILTGVV+K KMQRTIVIRRDYL Sbjct: 65 RGRILTGVVRKAKMQRTIVIRRDYL 89 Score = 89.8 bits (213), Expect = 2e-18 Identities = 42/47 (89%), Positives = 43/47 (91%) Frame = +2 Query: 272 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNNLKVS 412 +RFEKRHRNMSVH SP FRDVE GDIVTIGECRPLSKTVRFN LKVS Sbjct: 96 SRFEKRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVS 142 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,758,558 Number of Sequences: 53049 Number of extensions: 376482 Number of successful extensions: 723 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 720 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1684597257 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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