BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30251 (483 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical pr... 112 1e-25 Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 3.1 Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 3.1 U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 27 5.4 Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical pr... 27 9.4 >Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical protein F40F11.1 protein. Length = 155 Score = 112 bits (270), Expect = 1e-25 Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 3/87 (3%) Frame = +3 Query: 3 QTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNV 173 QTE+AF KQ TV LN K + +K R+ + VGLGFK PR+A+EGTYIDKKCP+ GNV Sbjct: 4 QTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWAGNV 63 Query: 174 SXRGRILTGVVQKMKMQRTIVIRRDYL 254 RG ILTGVV K KM RTIV+RRDYL Sbjct: 64 PIRGMILTGVVLKNKMTRTIVVRRDYL 90 Score = 77.8 bits (183), Expect = 4e-15 Identities = 33/46 (71%), Positives = 39/46 (84%) Frame = +2 Query: 275 RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNNLKVS 412 R+EKRH+N+ H SP FRD+ GD+VTIGECRPLSKTVRFN LKV+ Sbjct: 98 RYEKRHKNVPAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKVN 143 >Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein F25H8.3 protein. Length = 2165 Score = 28.3 bits (60), Expect = 3.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 66 SSCHLSCSGKRWPVSETLSLSD 1 +SC++ CSG++W E S S+ Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032 >Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical protein F25H8.3 protein. Length = 2165 Score = 28.3 bits (60), Expect = 3.1 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 66 SSCHLSCSGKRWPVSETLSLSD 1 +SC++ CSG++W E S S+ Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSE 1032 >U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical protein F47D12.5 protein. Length = 633 Score = 27.5 bits (58), Expect = 5.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 397 IESNCFGQRSAFADRYNITNLHVPEARRQMHGH 299 +E CF Q F D +N+T L + + R M+ H Sbjct: 131 VELECFEQ---FVDLFNLTGLRILDVSRSMYKH 160 >Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical protein ZK662.5 protein. Length = 598 Score = 26.6 bits (56), Expect = 9.4 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +1 Query: 301 VRAFVALLQGRGDW*YCNDRRMQ 369 +RAFV L++ DW Y RRMQ Sbjct: 250 LRAFVRLIRNNSDW-YARYRRMQ 271 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,221,555 Number of Sequences: 27780 Number of extensions: 190284 Number of successful extensions: 451 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 450 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 892829112 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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