Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30248
(451 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 151 2e-37
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 151 2e-37
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 149 8e-37
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 44 4e-05
03_02_0973 - 12826036-12826131,12826379-12826462,12826542-128265... 33 0.080
03_05_0291 - 22837412-22838128 29 1.3
05_01_0098 - 659570-660388 29 1.7
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 28 3.0
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 28 3.0
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 3.0
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 28 3.0
05_05_0036 - 21758409-21758531,21758891-21759206,21759964-217611... 28 4.0
06_01_0221 + 1690978-1692171,1692265-1692276 27 5.3
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 27 5.3
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 27 7.0
06_02_0175 - 12624608-12625297 27 7.0
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 27 7.0
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 27 9.2
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787 27 9.2
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 27 9.2
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 27 9.2
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 27 9.2
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 27 9.2
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 27 9.2
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 151 bits (367), Expect = 2e-37
Identities = 71/94 (75%), Positives = 83/94 (88%), Gaps = 3/94 (3%)
Frame = +2
Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181
RGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++A
Sbjct: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
Query: 182 TVKKGKPELRKKVMPAVVIRQRKP---SEGVMEY 274
TVKKGKP+LRKKVMPAV++RQRKP +GV Y
Sbjct: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMY 97
Score = 88.2 bits (209), Expect = 3e-18
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1
Query: 256 RRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384
RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 89 RRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 131
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 151 bits (367), Expect = 2e-37
Identities = 71/94 (75%), Positives = 83/94 (88%), Gaps = 3/94 (3%)
Frame = +2
Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181
RGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++A
Sbjct: 4 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA 63
Query: 182 TVKKGKPELRKKVMPAVVIRQRKP---SEGVMEY 274
TVKKGKP+LRKKVMPAV++RQRKP +GV Y
Sbjct: 64 TVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMY 97
Score = 88.2 bits (209), Expect = 3e-18
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1
Query: 256 RRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384
RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 89 RRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 131
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 149 bits (362), Expect = 8e-37
Identities = 70/93 (75%), Positives = 82/93 (88%), Gaps = 3/93 (3%)
Frame = +2
Query: 5 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVAT 184
GRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++AT
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 81
Query: 185 VKKGKPELRKKVMPAVVIRQRKP---SEGVMEY 274
VKKGKP+LRKKVMPAV++RQRKP +GV Y
Sbjct: 82 VKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMY 114
Score = 88.2 bits (209), Expect = 3e-18
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1
Query: 256 RRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384
RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPR
Sbjct: 106 RRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPR 148
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 238 QAAETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 363
+AA R DG I F+DNA V+VNNKGE+ G+ + GPV E
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKGELIGTRVFGPVPHE 153
>03_02_0973 -
12826036-12826131,12826379-12826462,12826542-12826595,
12826742-12826830,12826889-12826985,12827066-12827074,
12827419-12827478,12828082-12828204,12828654-12828758,
12830203-12830535
Length = 349
Score = 33.5 bits (73), Expect = 0.080
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +2
Query: 152 AAGSGDMIVATVKKGK----PELRKKVMPAVVIRQRKPSEGVME 271
AAG +++A KKGK P + +MPA++ + R PS G+M+
Sbjct: 219 AAGHACLVLAAGKKGKRYMFPHAKDSIMPAMIQQPRIPSYGMMQ 262
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -3
Query: 398 AFEAIRGHRSAHSLATGPVMAEPFI--SPLLLTMTPALSS 285
+++A+ GH+++H T P MA + P T +PA SS
Sbjct: 100 SYQALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASS 139
>05_01_0098 - 659570-660388
Length = 272
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 211 EKGNAGSGHQAAETVRRRDGVFIY 282
+ G+AG G A ET R +DGV IY
Sbjct: 171 DAGDAGGGGLARETARFKDGVTIY 194
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 205 FRFTLFDCGHNHVPGTGRRQSVQATFDTLDSDHIQILCPCVVGAVDYCSHW 53
FRF + D H+ GT + + ++ T+D H L + Y S+W
Sbjct: 455 FRFCIADSEHDWREGTDQYKFIEQCLSTVDRKHQPWLIFAAHRVLGYSSNW 505
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 286 EDNAGVIV--NNKGEMKGSAITGPVAKECAD 372
ED +I+ N+KG +GS ITG + + CA+
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCAE 745
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 93 APVLSAQLITAPTGRPREIRNFAPAEPPRP 4
AP S+ L TAP P + + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 14 GSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAG 160
GSA A + L A + +TG GI G L+RLPA G
Sbjct: 327 GSAAAIMSATALLQKAAELGATTSTGCYGGVAFPAMGIAGGLDRLPAIG 375
>05_05_0036 -
21758409-21758531,21758891-21759206,21759964-21761121,
21761236-21761333
Length = 564
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 179 ATVKKGKPELRKKVMPAVVIRQRKPSEGVMEYLYT 283
A VK KP+L+KKV A + +K E V + LYT
Sbjct: 120 AVVKTVKPQLKKKVGGA--SQDKKVGEAVQDLLYT 152
>06_01_0221 + 1690978-1692171,1692265-1692276
Length = 401
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 186 TVATIMSPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQLITA 61
++A + S P + + FRR L+P+ A F A S LI A
Sbjct: 160 SLAVLSSSFPPSSAAFRRELLPYMAPLLAFLAKTGSPFLINA 201
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 84 LSAQLITAPTGRPREIRNFAPAEPP 10
++A+ TAP GRP + FAP+ PP
Sbjct: 345 VTARPTTAPGGRPPKRPAFAPSAPP 369
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 84 LSAQLITAPTGRPREIRNFAPAEPP 10
++A TAP GRP + FAP+ PP
Sbjct: 514 VTASPTTAPGGRPPKRPAFAPSAPP 538
>06_02_0175 - 12624608-12625297
Length = 229
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 151 GGRFRGHDCGHSQKG*T*TPEKGNAGSGHQAAETVRRRDGV 273
GGR CG+ ++ E G G G + T R R+GV
Sbjct: 125 GGRRCWWGCGNGRRRHKGGKEGGGGGEGRKGIRTEREREGV 165
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 267 ITPSDG-FRCLMTTAGITFFRSSGLPFLTVA-TIMSPEPAAGSLFRRPLIPWTAITYRFF 94
+TP D +R L I F S L + + TI +P P+ ++ +R + A+T F+
Sbjct: 240 VTPMDKVWRSLQAFGDIAFAYSYSLILIEIQDTIRAPPPSESAVMKRATVVSVAVTTVFY 299
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 179 PQSCPRNRPPAVCSGDL 129
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 179 PQSCPRNRPPAVCSGDL 129
P+SCP + PP V S DL
Sbjct: 434 PESCPSSLPPFVVSSDL 450
>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
Length = 366
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 84 LSAQLITAPTGRPREIRNFAPAEP 13
++A+ TAP+GRP FAP+ P
Sbjct: 295 ITARPTTAPSGRPPRRPTFAPSAP 318
>06_03_0650 +
23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 118 PRYQRSPEQTAGGRFRGHDCGHSQKG 195
PR+Q + + GGR GH GH G
Sbjct: 4 PRHQPAAGKAGGGRGHGHGHGHGGGG 29
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 179 PQSCPRNRPPAVCSGDL 129
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 179 PQSCPRNRPPAVCSGDL 129
P+SCP + PP V S DL
Sbjct: 257 PESCPSSLPPFVVSSDL 273
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 26.6 bits (56), Expect = 9.2
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = -2
Query: 168 SPEPAAGSLFRRPLIPWTAITYRFFAPVLSAQLITAPTGRPREIRNFAPAEPPRP 4
+P P+ S RRP P AI A VL AP RPR +R A PRP
Sbjct: 118 APRPST-SRRRRPASPRAAIATSVEAVVL------APGRRPRSVRAEVVAIAPRP 165
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 59 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSG 166
GA CA+ T A + +A +GI+G N P G G
Sbjct: 625 GAGAGCANQTAAVRVDGVAYRGIRGTYN--PRGGGG 658
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,510,919
Number of Sequences: 37544
Number of extensions: 314224
Number of successful extensions: 1096
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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