BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30248 (451 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 159 3e-39 X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 159 4e-39 X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 159 4e-39 BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 159 4e-39 BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 159 4e-39 BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 159 4e-39 AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 159 4e-39 BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 153 4e-37 BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 141 1e-33 AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 29 5.5 AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 29 5.5 AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 29 5.5 AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens ... 29 5.5 AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens ... 29 5.5 AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protei... 29 5.5 AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. 29 5.5 >BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 159 bits (387), Expect = 3e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVRPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein protein. Length = 140 Score = 159 bits (386), Expect = 4e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVHPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 protein. Length = 140 Score = 159 bits (386), Expect = 4e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVHPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. Length = 140 Score = 159 bits (386), Expect = 4e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVHPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 159 bits (386), Expect = 4e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVHPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 159 bits (386), Expect = 4e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVHPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 protein. Length = 140 Score = 159 bits (386), Expect = 4e-39 Identities = 75/83 (90%), Positives = 81/83 (97%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKKVMPAVVIRQRK 250 TVKKGKPELRKKV PAVVIRQRK Sbjct: 64 TVKKGKPELRKKVHPAVVIRQRK 86 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 86 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131 >BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal protein L23 protein. Length = 134 Score = 153 bits (370), Expect = 4e-37 Identities = 72/80 (90%), Positives = 78/80 (97%) Frame = +2 Query: 11 GGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVK 190 GGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVK Sbjct: 1 GGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVK 60 Query: 191 KGKPELRKKVMPAVVIRQRK 250 KGKPELRKKV PAVVIRQRK Sbjct: 61 KGKPELRKKVHPAVVIRQRK 80 Score = 95.5 bits (227), Expect = 7e-20 Identities = 41/46 (89%), Positives = 45/46 (97%) Frame = +1 Query: 247 ETVRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 384 ++ RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR Sbjct: 80 KSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125 >BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. Length = 77 Score = 141 bits (341), Expect = 1e-33 Identities = 65/72 (90%), Positives = 71/72 (98%) Frame = +2 Query: 2 RGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVA 181 RGRGGS+GAKFRISLGLPVGAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++A Sbjct: 4 RGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMA 63 Query: 182 TVKKGKPELRKK 217 TVKKGKPELRKK Sbjct: 64 TVKKGKPELRKK 75 >AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1 protein. Length = 1906 Score = 29.5 bits (63), Expect = 5.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 383 RGHRSAHSLATGPVMAEPFISPLLLTMTP 297 +G AH L+ GP+ P++ P LL +TP Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477 >AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein protein. Length = 568 Score = 29.5 bits (63), Expect = 5.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 383 RGHRSAHSLATGPVMAEPFISPLLLTMTP 297 +G AH L+ GP+ P++ P LL +TP Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139 >AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein protein. Length = 1285 Score = 29.5 bits (63), Expect = 5.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 383 RGHRSAHSLATGPVMAEPFISPLLLTMTP 297 +G AH L+ GP+ P++ P LL +TP Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856 >AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens cDNA FLJ16493 fis, clone CTONG3004550, weakly similar to Homo sapiens SH3-domain binding protein 4 (SH3BP4). ). Length = 852 Score = 29.5 bits (63), Expect = 5.5 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 220 YLFPEFRFTLFDCGHNHVPG 161 Y+ P F L CGHN++PG Sbjct: 379 YIHPNFTVVLTVCGHNYMPG 398 >AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens cDNA FLJ46632 fis, clone TRACH2024730, weakly similar to Homo sapiens SH3-domain binding protein 4 (SH3BP4). ). Length = 673 Score = 29.5 bits (63), Expect = 5.5 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 220 YLFPEFRFTLFDCGHNHVPG 161 Y+ P F L CGHN++PG Sbjct: 200 YIHPSFTVVLTVCGHNYMPG 219 >AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protein 7a5 protein. Length = 852 Score = 29.5 bits (63), Expect = 5.5 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -1 Query: 220 YLFPEFRFTLFDCGHNHVPG 161 Y+ P F L CGHN++PG Sbjct: 379 YIHPSFTVVLTVCGHNYMPG 398 >AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. Length = 1644 Score = 29.5 bits (63), Expect = 5.5 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 383 RGHRSAHSLATGPVMAEPFISPLLLTMTP 297 +G AH L+ GP+ P++ P LL +TP Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 70,774,358 Number of Sequences: 237096 Number of extensions: 1602062 Number of successful extensions: 3755 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3750 length of database: 76,859,062 effective HSP length: 84 effective length of database: 56,942,998 effective search space used: 3701294870 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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