Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30247
         (709 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09329 Cluster: Protein mlo2; n=1; Schizosaccharomyces ...    37   0.56 
UniRef50_Q22B60 Cluster: TPR Domain containing protein; n=1; Tet...    36   1.3  
UniRef50_Q8PVQ7 Cluster: Hypothetical membrane spanning protein;...    35   1.7  
UniRef50_A4QQH2 Cluster: Putative uncharacterized protein; n=3; ...    34   3.0  
UniRef50_O06827 Cluster: CONSERVED MEMBRANE PROTEIN; n=11; Actin...    33   9.1  
UniRef50_Q5MGF7 Cluster: Putative secreted peptide 30; n=1; Lono...    33   9.1  

>UniRef50_Q09329 Cluster: Protein mlo2; n=1; Schizosaccharomyces
           pombe|Rep: Protein mlo2 - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 329

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 267 CLGKVHTGVSLPSSSLHDWCMTASCAQKYRVH 172
           CL K + G+++P +   +W + + C++KYR H
Sbjct: 152 CLQKTNKGIAIPDAETFEWLVCSECSEKYRDH 183


>UniRef50_Q22B60 Cluster: TPR Domain containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: TPR Domain containing
            protein - Tetrahymena thermophila SB210
          Length = 1108

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 22/55 (40%), Positives = 29/55 (52%)
 Frame = +1

Query: 532  YDKHN*ESFVTTKTVQYSNNMIINNVIIYRKRSFNYIYDSQIPRKRLQQLNQRNN 696
            YD HN   F   KT+Q+ NNM INN    +  S   + ++QI     Q + QRNN
Sbjct: 999  YDNHN-NYFEENKTLQH-NNMNINNYSFQQNNSQVGVDNNQIKMDNHQNIAQRNN 1051


>UniRef50_Q8PVQ7 Cluster: Hypothetical membrane spanning protein;
           n=1; Methanosarcina mazei|Rep: Hypothetical membrane
           spanning protein - Methanosarcina mazei (Methanosarcina
           frisia)
          Length = 156

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = +2

Query: 305 SLLEKMLVLFFYFTCSITSFKLLMKFFWWWNVLLGHRVGATSMFIADAML 454
           SL++ +++++ +    + SFK   +  WWW++LL   +G     I+ +++
Sbjct: 53  SLIDTLILVYLFLGTYLGSFKSFFERIWWWDILLHLLMGVNIALISFSVI 102


>UniRef50_A4QQH2 Cluster: Putative uncharacterized protein; n=3;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 596

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 10/29 (34%), Positives = 22/29 (75%)
 Frame = -2

Query: 429 LVAPTLWPKSTFHHQKNFISSLNDVILQV 343
           LV P +WP+ST+HH ++ I  +++++ ++
Sbjct: 72  LVTPFVWPQSTYHHDESLIPHIDEMLAEL 100


>UniRef50_O06827 Cluster: CONSERVED MEMBRANE PROTEIN; n=11;
           Actinomycetales|Rep: CONSERVED MEMBRANE PROTEIN -
           Mycobacterium tuberculosis
          Length = 589

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 317 KMLVLFFYFTCSITSFKLLMKFFWW 391
           K+ V FF FT  I +FK++M   WW
Sbjct: 218 KLFVFFFPFTDQIAAFKIIMLCLWW 242


>UniRef50_Q5MGF7 Cluster: Putative secreted peptide 30; n=1; Lonomia
           obliqua|Rep: Putative secreted peptide 30 - Lonomia
           obliqua (Moth)
          Length = 62

 Score = 32.7 bits (71), Expect = 9.1
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 8   KTLVFCVCVTLASAAIQRSALEPIPDKFSGLQGCYIREFDGVLPF 142
           K  +  + + +A+AA     L   P + +  +GCY+ E + V+PF
Sbjct: 4   KIFIISLVICMANAATWMGMLPKKPKQLAHKEGCYVEEINDVVPF 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,821,422
Number of Sequences: 1657284
Number of extensions: 12878975
Number of successful extensions: 31007
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30996
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)