Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30247
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -2

Query: 618 VYYHVINDHIIRILHSFRGHKRLLIMLIVHNSNCRNTITQI 496
           VYYH I    + + +S  G++ LLI   + +    +T+  +
Sbjct: 354 VYYHRILGETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTV 394


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 107 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELG 235
           CY     G     S+  S++ +C RY  A D        D LG
Sbjct: 616 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLG 658


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 107 CYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELG 235
           CY     G     S+  S++ +C RY  A D        D LG
Sbjct: 508 CYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGNDGNQSDDNLG 550


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 592 MIINNVIIYRKRSFNYIYDSQI 657
           +++N V ++RKR  NY  DS I
Sbjct: 88  IVVNIVHVFRKRRVNY-KDSNI 108


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 332 FFYFTCSITSFKLL 373
           +FYF+  ITS+ LL
Sbjct: 55  YFYFSFYITSYTLL 68


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 396 FHHQKNFISSLN 361
           + HQKNFI+  N
Sbjct: 178 YRHQKNFINESN 189


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 332 FFYFTCSITSFKLL 373
           +FYF+  ITS+ LL
Sbjct: 55  YFYFSFYITSYTLL 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,838
Number of Sequences: 336
Number of extensions: 3596
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)