Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30246
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1A4J2 Cluster: ALK-EXO; n=4; Granulovirus|Rep: ALK-EXO...    36   0.77 
UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    35   2.4  

>UniRef50_Q1A4J2 Cluster: ALK-EXO; n=4; Granulovirus|Rep: ALK-EXO -
           Choristoneura occidentalis granulovirus
          Length = 403

 Score = 36.3 bits (80), Expect = 0.77
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +1

Query: 487 NKT---IKIHRLSTNGKYKIKYYSGLL-RNGPLHCNRTHSTRQLRLLLLTVFVKNAFFVI 654
           NKT   I+  + +T G Y++++ + L+ RNGPLH   T      R +   ++V NA   +
Sbjct: 160 NKTLEQIRREKNNTRGAYRVEHTALLVNRNGPLHVTVTERNEHYRQMQSQIYVTNAIMAV 219

Query: 655 NMHK 666
            M K
Sbjct: 220 YMVK 223


>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +1

Query: 529  YKIKYYSGLLRNGPLHCNRTHSTRQLRLLLLTVFVKNAFFVINMHKEENLEITKLTRETK 708
            YK  YY   +    +H N  +    ++   LT+F KN F +IN +K++N+ +      +K
Sbjct: 4330 YKYNYYLYYIHKNKVHINHNNDVSYIQNNPLTLF-KNKFNIIN-NKDDNMNLNLNQSNSK 4387

Query: 709  CK 714
            C+
Sbjct: 4388 CQ 4389


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,961,287
Number of Sequences: 1657284
Number of extensions: 10565953
Number of successful extensions: 18658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18655
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)