BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30245 (639 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.8 U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.8 Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 28 6.5 Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 28 6.5 Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical pr... 28 6.5 Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 8.6 >U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical protein F49E10.2a protein. Length = 790 Score = 29.1 bits (62), Expect = 2.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 365 SSPSTTQATGSHLPQHWPLSASAGTYFQPGW 273 ++P T T +P+ WPL+ S T QP W Sbjct: 675 TTPQTVPTTTPKIPRWWPLAGSGSTE-QPWW 704 >U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical protein F49E10.2b protein. Length = 842 Score = 29.1 bits (62), Expect = 2.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 365 SSPSTTQATGSHLPQHWPLSASAGTYFQPGW 273 ++P T T +P+ WPL+ S T QP W Sbjct: 675 TTPQTVPTTTPKIPRWWPLAGSGSTE-QPWW 704 >Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical protein Y69H2.3c protein. Length = 731 Score = 27.9 bits (59), Expect = 6.5 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = +3 Query: 21 PAATCAVSACPAVVSSE--LLCYSRAPCPSHPA 113 P CA C A + + L+ ++APCPSH A Sbjct: 312 PVGGCATMRCSAGTTCQEALVKCAKAPCPSHAA 344 >Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical protein Y69H2.3b protein. Length = 796 Score = 27.9 bits (59), Expect = 6.5 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = +3 Query: 21 PAATCAVSACPAVVSSE--LLCYSRAPCPSHPA 113 P CA C A + + L+ ++APCPSH A Sbjct: 377 PVGGCATMRCSAGTTCQEALVKCAKAPCPSHAA 409 >Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical protein ZK632.3 protein. Length = 510 Score = 27.9 bits (59), Expect = 6.5 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 466 CPEISDAERKQFVLKSRRSQGSAAPRSNVRRVEWE 570 CP+ R V+ QG AAPR ++ VEWE Sbjct: 325 CPQPVKVRRNVLVMSFLGDQGLAAPR--LKNVEWE 357 >Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical protein C30H6.11 protein. Length = 460 Score = 27.5 bits (58), Expect = 8.6 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%) Frame = +1 Query: 283 WKYVPAEADSGQCC-GKCEPVACVVDGEEKPIGEKWTSSDFCTNFTCVNLNGTLQVQSSN 459 + + P + D G+ C G C D I KW +D T T T ++ Sbjct: 22 YDFYPGQMDDGRSCTGSVAWALCKYDPNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTP 81 Query: 460 ET 465 T Sbjct: 82 TT 83 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,501,403 Number of Sequences: 27780 Number of extensions: 283025 Number of successful extensions: 1048 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 985 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1048 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1416829972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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