Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30245
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z22181-2|CAA80180.1|  510|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical
           protein F49E10.2a protein.
          Length = 790

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 365 SSPSTTQATGSHLPQHWPLSASAGTYFQPGW 273
           ++P T   T   +P+ WPL+ S  T  QP W
Sbjct: 675 TTPQTVPTTTPKIPRWWPLAGSGSTE-QPWW 704


>U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical
           protein F49E10.2b protein.
          Length = 842

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 365 SSPSTTQATGSHLPQHWPLSASAGTYFQPGW 273
           ++P T   T   +P+ WPL+ S  T  QP W
Sbjct: 675 TTPQTVPTTTPKIPRWWPLAGSGSTE-QPWW 704


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 21  PAATCAVSACPAVVSSE--LLCYSRAPCPSHPA 113
           P   CA   C A  + +  L+  ++APCPSH A
Sbjct: 312 PVGGCATMRCSAGTTCQEALVKCAKAPCPSHAA 344


>Z98877-4|CAB54473.2|  796|Caenorhabditis elegans Hypothetical
           protein Y69H2.3b protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 21  PAATCAVSACPAVVSSE--LLCYSRAPCPSHPA 113
           P   CA   C A  + +  L+  ++APCPSH A
Sbjct: 377 PVGGCATMRCSAGTTCQEALVKCAKAPCPSHAA 409


>Z22181-2|CAA80180.1|  510|Caenorhabditis elegans Hypothetical
           protein ZK632.3 protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 466 CPEISDAERKQFVLKSRRSQGSAAPRSNVRRVEWE 570
           CP+     R   V+     QG AAPR  ++ VEWE
Sbjct: 325 CPQPVKVRRNVLVMSFLGDQGLAAPR--LKNVEWE 357


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
 Frame = +1

Query: 283 WKYVPAEADSGQCC-GKCEPVACVVDGEEKPIGEKWTSSDFCTNFTCVNLNGTLQVQSSN 459
           + + P + D G+ C G      C  D     I  KW  +D  T  T      T    ++ 
Sbjct: 22  YDFYPGQMDDGRSCTGSVAWALCKYDPNTSIISPKWVKADCTTTSTTTTSTTTTTTPTTP 81

Query: 460 ET 465
            T
Sbjct: 82  TT 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,501,403
Number of Sequences: 27780
Number of extensions: 283025
Number of successful extensions: 1048
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)