Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30243X
         (549 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   9.4  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 263 IQTIDLERKKTEKHSRLIEESELPDW 186
           + +I  ++   EKH RL  ++  P W
Sbjct: 201 VYSIGAKKSPPEKHLRLRRDTAPPQW 226


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = -2

Query: 428  HPSWYVQPEVYW 393
            HP W  +P  +W
Sbjct: 1032 HPDWTTKPSTWW 1043


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 109 PRVSSSSK*FQPW 147
           PR  + SK F+PW
Sbjct: 468 PRTITESKNFEPW 480


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 278 FRTRYHCVNEIVIGNFIFFLFNN 346
           F  ++ C NE  + +++ F+F N
Sbjct: 81  FFQQFECDNEPKLRHYLIFIFVN 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,812
Number of Sequences: 336
Number of extensions: 2119
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)