Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30243X
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 80 1e-15
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative transp... 30 0.95
U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative transp... 30 0.95
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 29 2.2
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 29 2.2
U55370-5|AAA97996.1| 176|Caenorhabditis elegans Taf (tbp-associ... 29 2.9
U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 8.9
U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical p... 27 8.9
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 27 8.9
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3
Query: 505 RLMPVNSLEERILAAPGSKLTLAEKVTQAGMSNQKSTGSDRQQFLQSILHQAGXXXXXXX 326
RL+ NS+EE+ILAA KL + EKV QAG +Q+STG++R+Q L+ I+ QA
Sbjct: 973 RLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQII-QADGEEEEEE 1031
Query: 325 XVPDDDLINAMIARSEEELEIFK 257
VPDD+ +N M+ARSEEE IF+
Sbjct: 1032 EVPDDETVNQMVARSEEEFNIFQ 1054
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/85 (29%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Frame = -2
Query: 260 QTIDLERKKTEKHS-----RLIEESELPDWLVK---DDDEVVCNKGQGWNYLDEDETLGR 105
Q++D++R++ E + RL+EE E+PD ++K D +E+ + +G +D+
Sbjct: 1054 QSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTP---N 1110
Query: 104 GSRQRKEVDY-TDSLTEKEWLKAID 33
R+R+EVDY +D L++++++K ++
Sbjct: 1111 QRRRRREVDYSSDLLSDEQFMKQVE 1135
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3
Query: 505 RLMPVNSLEERILAAPGSKLTLAEKVTQAGMSNQKSTGSDRQQFLQSILHQAGXXXXXXX 326
RL+ NS+EE+ILAA KL + EKV QAG +Q+STG++R+Q L+ I+ QA
Sbjct: 973 RLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQII-QADGEEEEEE 1031
Query: 325 XVPDDDLINAMIARSEEELEIFK 257
VPDD+ +N M+ARSEEE IF+
Sbjct: 1032 EVPDDETVNQMVARSEEEFNIFQ 1054
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/85 (29%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Frame = -2
Query: 260 QTIDLERKKTEKHS-----RLIEESELPDWLVK---DDDEVVCNKGQGWNYLDEDETLGR 105
Q++D++R++ E + RL+EE E+PD ++K D +E+ + +G +D+
Sbjct: 1054 QSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTP---N 1110
Query: 104 GSRQRKEVDY-TDSLTEKEWLKAID 33
R+R+EVDY +D L++++++K ++
Sbjct: 1111 QRRRRREVDYSSDLLSDEQFMKQVE 1135
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3
Query: 505 RLMPVNSLEERILAAPGSKLTLAEKVTQAGMSNQKSTGSDRQQFLQSILHQAGXXXXXXX 326
RL+ NS+EE+ILAA KL + EKV QAG +Q+STG++R+Q L+ I+ QA
Sbjct: 973 RLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQII-QADGEEEEEE 1031
Query: 325 XVPDDDLINAMIARSEEELEIFK 257
VPDD+ +N M+ARSEEE IF+
Sbjct: 1032 EVPDDETVNQMVARSEEEFNIFQ 1054
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/85 (29%), Positives = 53/85 (62%), Gaps = 9/85 (10%)
Frame = -2
Query: 260 QTIDLERKKTEKHS-----RLIEESELPDWLVK---DDDEVVCNKGQGWNYLDEDETLGR 105
Q++D++R++ E + RL+EE E+PD ++K D +E+ + +G +D+
Sbjct: 1054 QSMDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTP---N 1110
Query: 104 GSRQRKEVDY-TDSLTEKEWLKAID 33
R+R+EVDY +D L++++++K ++
Sbjct: 1111 QRRRRREVDYSSDLLSDEQFMKQVE 1135
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 68.5 bits (160), Expect = 3e-12
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = -3
Query: 505 RLMPVNSLEERILAAPGSKLTLAEKVTQAGMSNQKSTGSDRQQFLQSILHQAGXXXXXXX 326
RL+ NS+EE+ILAA KL + EKV QAG + +STG++R++ L++I+ +
Sbjct: 806 RLITANSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAERREILENII-KTENESEEDE 864
Query: 325 XVPDDDLINAMIARSEEELEIFKQ 254
VP+D+ IN +++RSEEE E+F++
Sbjct: 865 EVPNDEDINDILSRSEEEFELFQK 888
>Z35400-1|CAA84584.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 284 FGRRAGDIQTIDLERKKTEKHSRLIEESELPDWLVKDDDE 165
FG + E K EK +R+++++E D L++ DDE
Sbjct: 16 FGTNTNALPMSREETKTVEKFTRILKDAETDDLLIQSDDE 55
>U12433-1|AAA20582.1| 532|Caenorhabditis elegans putative
transposase protein.
Length = 532
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 284 FGRRAGDIQTIDLERKKTEKHSRLIEESELPDWLVKDDDE 165
FG + E K EK +R+++++E D L++ DDE
Sbjct: 16 FGTNTNALPMSREETKTVEKFTRILKDAETDDLLIQSDDE 55
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 391 SDRQQFLQSILHQAGXXXXXXXXVPDDDLINAMIARSEEELEIFK 257
SD+Q+F LH + D+DLI ++ RSE +LE+ K
Sbjct: 243 SDKQKFFAQQLHAS----MKGLGTRDNDLIRVIVTRSEVDLELIK 283
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 391 SDRQQFLQSILHQAGXXXXXXXXVPDDDLINAMIARSEEELEIFK 257
SD+Q+F LH + D+DLI ++ RSE +LE+ K
Sbjct: 243 SDKQKFFAQQLHAS----MKGLGTRDNDLIRVIVTRSEVDLELIK 283
>U55370-5|AAA97996.1| 176|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 10,
isoform a protein.
Length = 176
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 502 LMPVNSLEERILAAPGSKLTLAEKVTQAGMSNQKSTGSDRQQFLQSIL 359
LMP +L +R AAP TL V S K ++QQF+Q L
Sbjct: 17 LMPPPALPQRPAAAPQVYSTLEPSVQNLRSSLHKPLTGNQQQFVQKTL 64
>U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical
protein C01G5.3 protein.
Length = 479
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -2
Query: 254 IDLERKKTEKHSRLIEESELPDWLVKDDDEVVCNKGQGWNYLDEDETLGRGSRQRKEVD 78
++ +KK + SR + E + VKDD++V +KG D+D L SR E +
Sbjct: 63 VEKMKKKKKDDSRTEDFREQQEDAVKDDEDVQPSKGLIPTRFDQDMNLEVTSRDVDETE 121
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 396 VDFWLDIPAWVTFSAKVNLEPGA-AKILSSKEL 491
++ W+ +PAW + + N++ GA LS +E+
Sbjct: 876 LELWVGMPAWYVAACRANVKSGAIMSALSDQEI 908
>U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical
protein B0222.11 protein.
Length = 356
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -3
Query: 529 PPD*SPCPRLMPVNSLEERILAAPGSKLTLAEKVTQ--AGMSNQKSTG-SDRQQFLQSIL 359
PP+ P + SLEE I+A P +T EK Q A ++N K+ D + L+S L
Sbjct: 60 PPNCIPYDSRLQAASLEEAIVAFPDLTITRQEKTQQSTATLNNCKTKQCRDCYKDLRSQL 119
Query: 358 HQAG 347
+ G
Sbjct: 120 RKVG 123
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 396 VDFWLDIPAWVTFSAKVNLEPGA-AKILSSKEL 491
++ W+ +PAW + + N++ GA LS +E+
Sbjct: 876 LELWVGMPAWYVAACRANVKSGAIMSALSDQEI 908
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,940,417
Number of Sequences: 27780
Number of extensions: 209175
Number of successful extensions: 670
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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