Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30241
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0Q551 Cluster: Putative uncharacterized protein; n=8; ...    37   0.54 
UniRef50_Q9PYP9 Cluster: ORF147; n=1; Xestia c-nigrum granulovir...    36   1.3  
UniRef50_A4VDG4 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_A0Q551 Cluster: Putative uncharacterized protein; n=8;
           Francisella tularensis|Rep: Putative uncharacterized
           protein - Francisella tularensis subsp. novicida (strain
           U112)
          Length = 87

 Score = 36.7 bits (81), Expect = 0.54
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 500 YKNKVGC-CHVVERSPLCSK*NYIWIALFAQHVTVYIILHGICRIVYILQ*IKKN*DYF 673
           YKN +GC C V+  +  C     I + +F      YII+ GIC I  +L  IKK   Y+
Sbjct: 21  YKNILGCICLVIILAIFCISELAILLGIFMLFAIFYIIITGICAIYILLVGIKKISKYY 79


>UniRef50_Q9PYP9 Cluster: ORF147; n=1; Xestia c-nigrum
           granulovirus|Rep: ORF147 - Xestia c-nigrum granulosis
           virus (XnGV) (Xestia c-nigrumgranulovirus)
          Length = 309

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -3

Query: 531 TTWQHPTLFLYHN-CHIFKFRIYMIKNQYVYYLLSVMETLVERKVPSIG 388
           + W +   F+Y++ CH F   I      Y YY+L  +E     K+P++G
Sbjct: 7   SVWYNKDKFIYNSTCHPFWHNILYYSQYYTYYVLYYVENESSAKIPAVG 55


>UniRef50_A4VDG4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2356

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = -1

Query: 632 QSYIYHVILYKQLRVVQKVRSKYNFIYYIADYAPLHGNTQLCFYTITVIFLN 477
           Q+Y+Y +I  KQL +++ ++ K+  I Y+  +   +    L  +TIT I LN
Sbjct: 106 QNYLYIIIFCKQLEILKFLKLKFLEIIYLQLFIQQY-TKYLILHTITAIILN 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,405,271
Number of Sequences: 1657284
Number of extensions: 11040469
Number of successful extensions: 22429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22424
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)