Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30241
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -1

Query: 623 IYHVILYKQLRVVQKVRSKYNFIYYIADYAPLHGNTQLCFYTITVIFLN 477
           +Y  ++Y  LRV + +RS Y   Y + +    + NT   +Y + V  LN
Sbjct: 21  LYFSVIYSLLRVKRMMRSWY---YLLTNLT--YNNTNRKYYWLNVCCLN 64


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 513 TLFLYHNCHIFKFRIYMIKNQYVYYLLSVMETLVERKVPSIGL 385
           T+F   +C++    + M+KN+Y+  +L+     +E K  S+ L
Sbjct: 811 TIFNAAHCYLATELVLMLKNRYI--ILNGRLIKMETKAQSVAL 851


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -3

Query: 168 DSFRVKKEKLLWLKSVVHTRGSIISTFNFCAFLLHSNL*LSTFSIFLPLNKLL 10
           D F  + ++  + + + H  G   + FN     L + L L   + F+ LNK L
Sbjct: 150 DYFVQRNQEYKYYQILSHLSGIFFTVFNVAQCYLTTELVLMLQTRFVILNKQL 202


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 561 IIFGSHFLHNT*LFI*YYMVYVGLCIFY 644
           IIF  H L    ++  Y  + + LCI+Y
Sbjct: 273 IIFTMHLLFLLCIYYFYCALIILLCIYY 300


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -2

Query: 607 YINSYVLCKKCDPNIILFTT*RTTLHYMATP 515
           YINSY+       N  LFT  +  +  +A P
Sbjct: 42  YINSYLFSLSLAQNNQLFTHHKAPIRPVALP 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,915
Number of Sequences: 336
Number of extensions: 3465
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)