BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30241 (695 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 31 1.0 Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical pr... 28 5.5 AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine re... 28 7.3 >Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical protein R107.4d protein. Length = 817 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 57 NLNAKETRRN*MC**WTL*CGLHFSATRAFPSSHEKS 167 N K + C W L C L+F AT FP HE++ Sbjct: 220 NWKTKSAYTSEQCDLWALGCTLYFCATGKFPFEHERN 256 >Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical protein R107.4c protein. Length = 816 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 57 NLNAKETRRN*MC**WTL*CGLHFSATRAFPSSHEKS 167 N K + C W L C L+F AT FP HE++ Sbjct: 220 NWKTKSAYTSEQCDLWALGCTLYFCATGKFPFEHERN 256 >Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical protein R107.4b protein. Length = 820 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 57 NLNAKETRRN*MC**WTL*CGLHFSATRAFPSSHEKS 167 N K + C W L C L+F AT FP HE++ Sbjct: 220 NWKTKSAYTSEQCDLWALGCTLYFCATGKFPFEHERN 256 >Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical protein R107.4a protein. Length = 754 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 57 NLNAKETRRN*MC**WTL*CGLHFSATRAFPSSHEKS 167 N K + C W L C L+F AT FP HE++ Sbjct: 220 NWKTKSAYTSEQCDLWALGCTLYFCATGKFPFEHERN 256 >Z81123-2|CAB03365.1| 734|Caenorhabditis elegans Hypothetical protein T14D7.2 protein. Length = 734 Score = 28.3 bits (60), Expect = 5.5 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 468 YMIKNQYVYYLLSVMETLVERKVPSIG 388 + I +++YYLLS + L RK P IG Sbjct: 452 WYIGTEFIYYLLSPIFLLTLRKAPKIG 478 >AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine receptor, class h protein78 protein. Length = 353 Score = 27.9 bits (59), Expect = 7.3 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = -2 Query: 610 YYINSYVLCKKCDP---NIILFTT*RTTLHYMATPNFV 506 YY +Y C KCD ++ +FTT +L +A P ++ Sbjct: 7 YYSTNYTTCSKCDTFLCSLQVFTTLGCSLSVIAMPLYI 44 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,388,672 Number of Sequences: 27780 Number of extensions: 284417 Number of successful extensions: 644 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 622 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 644 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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