BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30238X (434 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 120 1e-27 U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 120 1e-27 U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 120 1e-27 AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 120 1e-27 AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 120 1e-27 BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 0.89 AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 0.89 >X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein S2 protein. Length = 267 Score = 120 bits (288), Expect = 1e-27 Identities = 58/73 (79%), Positives = 61/73 (83%) Frame = +1 Query: 214 KNRQTREHLLVFFTIKEFQIIDFFLGPSLNDQVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393 K + E L IKEF+IIDFFLG SL D+VLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 394 NGHIGLGVKCSKE 432 NGHIGLGVKCSKE Sbjct: 117 NGHIGLGVKCSKE 129 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 155 KEDQKEWVPVTKLGRLVRXXKIDKLESIYLFSLQSK 262 KED KEWVPVTKLGRLVR KI LE IYL+SL K Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein S2 protein. Length = 267 Score = 120 bits (288), Expect = 1e-27 Identities = 58/73 (79%), Positives = 61/73 (83%) Frame = +1 Query: 214 KNRQTREHLLVFFTIKEFQIIDFFLGPSLNDQVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393 K + E L IKEF+IIDFFLG SL D+VLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 394 NGHIGLGVKCSKE 432 NGHIGLGVKCSKE Sbjct: 117 NGHIGLGVKCSKE 129 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 155 KEDQKEWVPVTKLGRLVRXXKIDKLESIYLFSLQSK 262 KED KEWVPVTKLGRLVR KI LE IYL+SL K Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein S2 protein. Length = 267 Score = 120 bits (288), Expect = 1e-27 Identities = 58/73 (79%), Positives = 61/73 (83%) Frame = +1 Query: 214 KNRQTREHLLVFFTIKEFQIIDFFLGPSLNDQVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393 K + E L IKEF+IIDFFLG SL D+VLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 394 NGHIGLGVKCSKE 432 NGHIGLGVKCSKE Sbjct: 117 NGHIGLGVKCSKE 129 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 155 KEDQKEWVPVTKLGRLVRXXKIDKLESIYLFSLQSK 262 KED KEWVPVTKLGRLVR KI LE IYL+SL K Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p protein. Length = 267 Score = 120 bits (288), Expect = 1e-27 Identities = 58/73 (79%), Positives = 61/73 (83%) Frame = +1 Query: 214 KNRQTREHLLVFFTIKEFQIIDFFLGPSLNDQVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393 K + E L IKEF+IIDFFLG SL D+VLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 394 NGHIGLGVKCSKE 432 NGHIGLGVKCSKE Sbjct: 117 NGHIGLGVKCSKE 129 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 155 KEDQKEWVPVTKLGRLVRXXKIDKLESIYLFSLQSK 262 KED KEWVPVTKLGRLVR KI LE IYL+SL K Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA protein. Length = 267 Score = 120 bits (288), Expect = 1e-27 Identities = 58/73 (79%), Positives = 61/73 (83%) Frame = +1 Query: 214 KNRQTREHLLVFFTIKEFQIIDFFLGPSLNDQVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393 K + E L IKEF+IIDFFLG SL D+VLKIMPVQKQTRAGQRTRFKAFVAIGDN Sbjct: 57 KIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 116 Query: 394 NGHIGLGVKCSKE 432 NGHIGLGVKCSKE Sbjct: 117 NGHIGLGVKCSKE 129 Score = 57.6 bits (133), Expect = 7e-09 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 155 KEDQKEWVPVTKLGRLVRXXKIDKLESIYLFSLQSK 262 KED KEWVPVTKLGRLVR KI LE IYL+SL K Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIK 72 >BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p protein. Length = 823 Score = 30.7 bits (66), Expect = 0.89 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 161 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 18 L C H D R+H ++GL + V+ + REN VH + ++ LLN Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407 >AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA protein. Length = 1958 Score = 30.7 bits (66), Expect = 0.89 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 161 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 18 L C H D R+H ++GL + V+ + REN VH + ++ LLN Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,932,315 Number of Sequences: 53049 Number of extensions: 335712 Number of successful extensions: 2146 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1649 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1376136036 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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