Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30238X
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    27   0.12 
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    27   0.12 
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    27   0.12 
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    27   0.12 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   3.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.9  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 214 KNRQTREHLLVFFTIKEFQII 276
           KN QTREH L+ FT+   Q+I
Sbjct: 129 KNGQTREHALLAFTLGVKQLI 149


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 214 KNRQTREHLLVFFTIKEFQII 276
           KN QTREH L+ FT+   Q+I
Sbjct: 56  KNGQTREHALLAFTLGVKQLI 76


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 214 KNRQTREHLLVFFTIKEFQII 276
           KN QTREH L+ FT+   Q+I
Sbjct: 72  KNGQTREHALLAFTLGVKQLI 92


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 214 KNRQTREHLLVFFTIKEFQII 276
           KN QTREH L+ FT+   Q+I
Sbjct: 129 KNGQTREHALLAFTLGVKQLI 149


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +1

Query: 187 QTRPSCSXXKNRQTREHLLVFFTIKEFQIIDFFLGPSLNDQVLKIMPVQKQTRAGQRTR 363
           +T PS      R+  EH L  F   ++  + +FL    N +      ++K T   Q  R
Sbjct: 192 ETFPSVYSKTRRRALEHTLDRFHNDKYSNVPYFLFGDFNFRTDTAGVIKKLTEDTQERR 250



 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 247 KQVNALEFVDFSXANKTAEFGDRNPLFLVF 158
           + +++ + V++     T   GD  P+FL F
Sbjct: 355 QDISSPDAVEYGIIGPTTCMGDHKPVFLEF 384


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 246 FLYNQRIPDH 275
           F YN+ IPDH
Sbjct: 641 FYYNRSIPDH 650


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 246 FLYNQRIPDH 275
           F YN+ IPDH
Sbjct: 679 FYYNRSIPDH 688


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 116 HEDRRGLYLHRVIRIR 69
           HED+RG Y   +  IR
Sbjct: 495 HEDKRGCYQLAINHIR 510


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 116 HEDRRGLYLHRVIRIR 69
           HED+RG Y   +  IR
Sbjct: 585 HEDKRGCYQLAINHIR 600


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,901
Number of Sequences: 438
Number of extensions: 2123
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)