BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30237 (815 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 5.1 AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 5.1 AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 8.9 >AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane transporter protein. Length = 669 Score = 22.2 bits (45), Expect = 5.1 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +3 Query: 69 CVQAAPSNYKTLSRQKLFIQ 128 CV P + KTL+ Q ++Q Sbjct: 139 CVNGIPVSSKTLASQSAYVQ 158 >AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane transporter white protein. Length = 669 Score = 22.2 bits (45), Expect = 5.1 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +3 Query: 69 CVQAAPSNYKTLSRQKLFIQ 128 CV P + KTL+ Q ++Q Sbjct: 139 CVNGIPVSSKTLASQSAYVQ 158 >AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor candidate 48 protein. Length = 408 Score = 21.4 bits (43), Expect = 8.9 Identities = 11/35 (31%), Positives = 16/35 (45%) Frame = +3 Query: 360 YFLRVVKLNSYRILVEFSVVILKINYLFI*QYIFY 464 Y + + N Y L++ V YLF YI+Y Sbjct: 127 YNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYY 161 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 180,211 Number of Sequences: 336 Number of extensions: 3749 Number of successful extensions: 4 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 22310335 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -