Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30237
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    24   1.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   7.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   7.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   7.8  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 66  KNHDSCGVTSL*GVP 22
           K HD+CGV +L G+P
Sbjct: 324 KIHDTCGVHNLHGMP 338


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 686 YLENVVRFRHLTLLAVGPLVSPRG 757
           Y  ++VRFR  T+     L SPRG
Sbjct: 26  YFNSLVRFRRFTIELDKVLESPRG 49


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 215 ILNSSSPKNLTSSNGVILLSL 277
           ILN+ S   + S NGV+ L L
Sbjct: 304 ILNTQSFGKVVSKNGVLFLGL 324


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 665 VPNNNIWTVGLLS 627
           +P++ +W VGLL+
Sbjct: 3   IPSHQVWLVGLLA 15


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 665 VPNNNIWTVGLLS 627
           +P++ +W VGLL+
Sbjct: 3   IPSHQVWLVGLLA 15


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 563 KFDRLGVYDKGNLHRS 610
           KFDRL V D G ++R+
Sbjct: 132 KFDRLWVLDSGLVNRT 147


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 73  CRQLHRIIRRCHVKSSSFKAVTSHFIIM 156
           CR +HR+ R+  V S +   +  H  +M
Sbjct: 209 CRTMHRLTRQVVVSSVANVRIADHRGVM 236


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 73  CRQLHRIIRRCHVKSSSFKAVTSHFIIM 156
           CR +HR+ R+  V S +   +  H  +M
Sbjct: 209 CRTMHRLTRQVVVSSVANVRIADHRGVM 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,918
Number of Sequences: 438
Number of extensions: 4432
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)