Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30237
         (815 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23050.2 68417.m03324 protein kinase, putative similar to MAP...    29   2.8  
At4g23050.1 68417.m03323 protein kinase, putative similar to MAP...    29   2.8  
At3g10800.1 68416.m01300 bZIP transcription factor family protei...    28   8.5  

>At4g23050.2 68417.m03324 protein kinase, putative similar to MAP3K
           delta-1 protein kinase [Arabidopsis thaliana]
           gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein
           kinase domain and PF00989 PAS domain
          Length = 736

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 124 MKSF*RDNVL*FDGAACTHEKS*LMRRYL 38
           MK     NVL F GA CT EKS ++  Y+
Sbjct: 517 MKKLRHPNVLLFMGAVCTEEKSAIIMEYM 545


>At4g23050.1 68417.m03323 protein kinase, putative similar to MAP3K
           delta-1 protein kinase [Arabidopsis thaliana]
           gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein
           kinase domain and PF00989 PAS domain
          Length = 735

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 124 MKSF*RDNVL*FDGAACTHEKS*LMRRYL 38
           MK     NVL F GA CT EKS ++  Y+
Sbjct: 516 MKKLRHPNVLLFMGAVCTEEKSAIIMEYM 544


>At3g10800.1 68416.m01300 bZIP transcription factor family protein
           contains Pfam profile: PF00170 bZIP transcription
           factor; contains similarity to TGACG-sequence specific
           DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
           tabacum]
          Length = 675

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -1

Query: 617 RSMTDEDSLYRIPPNDRISDRIVLLLIITSPKYAYY 510
           R + D ++   +PPN +   RI +++++ S KY  Y
Sbjct: 626 REVVDSETDRVVPPNPKSLSRIFVVVLLDSVKYVTY 661


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,774,337
Number of Sequences: 28952
Number of extensions: 299205
Number of successful extensions: 564
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)