Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30236X
         (474 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CF9A4 Cluster: hypothetical protein TTHERM_0041...    32   7.4  
UniRef50_Q91ES6 Cluster: ORF129; n=1; Cydia pomonella granulovir...    32   7.4  
UniRef50_Q9W3R6 Cluster: CG2079-PA; n=3; Diptera|Rep: CG2079-PA ...    32   7.4  
UniRef50_A2EKJ8 Cluster: Putative uncharacterized protein; n=1; ...    31   9.8  
UniRef50_Q6BJQ1 Cluster: Similar to CA2603|IPF5471 Candida albic...    31   9.8  
UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14; Eutheri...    31   9.8  

>UniRef50_UPI00006CF9A4 Cluster: hypothetical protein
           TTHERM_00419990; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00419990 - Tetrahymena
           thermophila SB210
          Length = 1468

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 262 DEQNDFKKERDYPTLNRHRRRRWQLNYGYDYQPPRHYTERRDYYQNQQ 405
           +  N + K + +   + ++RR  Q N    YQ  R+   R D+YQN +
Sbjct: 836 NNNNYYNKNKHFKKYDNYKRRNSQSNERGGYQYGRYQNYRHDHYQNNR 883


>UniRef50_Q91ES6 Cluster: ORF129; n=1; Cydia pomonella
           granulovirus|Rep: ORF129 - Cydia pomonella granulosis
           virus (CpGV) (Cydia pomonellagranulovirus)
          Length = 128

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 131 IFVRNSTRSKMNKFTLVLGFLLLIAVVN 214
           +FV N+ R K NK+  VL FLL   +VN
Sbjct: 100 LFVNNACREKYNKYLFVLVFLLCAQIVN 127


>UniRef50_Q9W3R6 Cluster: CG2079-PA; n=3; Diptera|Rep: CG2079-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 622

 Score = 31.9 bits (69), Expect = 7.4
 Identities = 17/58 (29%), Positives = 33/58 (56%)
 Frame = +1

Query: 301 TLNRHRRRRWQLNYGYDYQPPRHYTERRDYYQNQQDLIPQIFRLLYELAVEVRRQPPP 474
           +LNR  +++    Y   ++  RH   R +  ++++D  P+IF L  E  V++ ++PPP
Sbjct: 21  SLNRISKKKACSRYCLLFKASRHGIARLEMCESKEDRNPKIFTL--ENCVKITQEPPP 76


>UniRef50_A2EKJ8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 188

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +1

Query: 271 NDFKKERDYPTLNRHRRRRWQLNYGY----DYQPPRHYTERRDY-YQNQQD 408
           ND+  + +Y   NR R RR +  Y Y    DY   R Y++RRD  Y +++D
Sbjct: 124 NDYYSDDEY---NRDRERRGRRRYDYSSDDDYDYHRRYSDRRDVRYMDRRD 171


>UniRef50_Q6BJQ1 Cluster: Similar to CA2603|IPF5471 Candida albicans
           IPF5471 of unknown function; n=1; Debaryomyces
           hansenii|Rep: Similar to CA2603|IPF5471 Candida albicans
           IPF5471 of unknown function - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 506

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 10/27 (37%), Positives = 20/27 (74%)
 Frame = +2

Query: 206 VVNARHYGDRRDSGSSEMMTNKTTSRK 286
           ++  RHYGD+ +SG S++ ++K++  K
Sbjct: 335 IIGTRHYGDKANSGHSKLFSSKSSMSK 361


>UniRef50_Q96T58 Cluster: Msx2-interacting protein; n=14;
           Eutheria|Rep: Msx2-interacting protein - Homo sapiens
           (Human)
          Length = 3664

 Score = 31.5 bits (68), Expect = 9.8
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +1

Query: 289 RDYPTLNRHRRRRWQLNYGYDYQPPRHYTERRDYYQNQQDLIPQIFR 429
           RDYP   R     W+   G DY   R+Y + R+Y   + D   Q  R
Sbjct: 648 RDYPARGREFYSEWETYQG-DYYESRYYDDPREYRDYRNDPYEQDIR 693


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,375,476
Number of Sequences: 1657284
Number of extensions: 7478253
Number of successful extensions: 17743
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17730
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)