Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30236X
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   2.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   5.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 215 ARHYGDRRDSGS-SEMMTNKTTSRKKEIT 298
           + HYG R  SGS S  ++ + +SR + +T
Sbjct: 797 SHHYGRRERSGSESSSISERCSSRVESLT 825


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 355 QPPRHYTERRDYYQNQQDLIP 417
           Q  R+Y    D YQ+ Q L+P
Sbjct: 172 QENRYYNNSPDQYQSYQILLP 192


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 362 PDIIPREETTIKTN 403
           PDI  REE  +K N
Sbjct: 152 PDIFMREEVAVKIN 165


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 362 PDIIPREETTIKTN 403
           PDI  REE  +K N
Sbjct: 94  PDIFMREEVALKIN 107


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +1

Query: 355 QPPRHYTERRDYYQ-NQQDLIPQ 420
           +PPRH+ E  D  + + + +IP+
Sbjct: 257 RPPRHFHEEHDTRRASSRGIIPR 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,585
Number of Sequences: 336
Number of extensions: 1754
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)