Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30235
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 124 4e-28
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 124 4e-28
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 124 4e-28
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 124 4e-28
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 124 4e-28
AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 97 8e-20
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 92 2e-18
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 92 2e-18
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 92 2e-18
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 92 2e-18
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 92 2e-18
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 31 5.6
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 31 5.6
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 31 5.6
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 124 bits (298), Expect = 4e-28
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3
Query: 510 LGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
LGLGHSYSRA+VKFNV+RVDNMII SI+LLDQLDKD+NTFSMR+REWY YHFPELV I+
Sbjct: 152 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 211
Query: 690 ENHLYTKCAEFM 725
+N Y + A+F+
Sbjct: 212 DNATYCRLAQFI 223
Score = 96.7 bits (230), Expect = 8e-20
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 FNSFSTTQVGDRCFGNINAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 390
F F+++QV N NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 57 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 111
Query: 391 EALEIQCTHTGAVPEILRGIRYHFHSLIKGLT-LKACSVARLAL 519
E L C G + EILRG+R HFH+L+KGLT L AC A+L L
Sbjct: 112 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 154
Score = 64.5 bits (150), Expect = 4e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 71 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 250
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 7 MVLLHVLFEHAVGYALVALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 66
Query: 251 LE 256
LE
Sbjct: 67 LE 68
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 124 bits (298), Expect = 4e-28
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3
Query: 510 LGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
LGLGHSYSRA+VKFNV+RVDNMII SI+LLDQLDKD+NTFSMR+REWY YHFPELV I+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 690 ENHLYTKCAEFM 725
+N Y + A+F+
Sbjct: 206 DNATYCRLAQFI 217
Score = 96.7 bits (230), Expect = 8e-20
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 FNSFSTTQVGDRCFGNINAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 390
F F+++QV N NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 391 EALEIQCTHTGAVPEILRGIRYHFHSLIKGLT-LKACSVARLAL 519
E L C G + EILRG+R HFH+L+KGLT L AC A+L L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 71 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 250
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 251 LE 256
LE
Sbjct: 61 LE 62
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 124 bits (298), Expect = 4e-28
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3
Query: 510 LGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
LGLGHSYSRA+VKFNV+RVDNMII SI+LLDQLDKD+NTFSMR+REWY YHFPELV I+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 690 ENHLYTKCAEFM 725
+N Y + A+F+
Sbjct: 206 DNATYCRLAQFI 217
Score = 96.7 bits (230), Expect = 8e-20
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 FNSFSTTQVGDRCFGNINAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 390
F F+++QV N NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 391 EALEIQCTHTGAVPEILRGIRYHFHSLIKGLT-LKACSVARLAL 519
E L C G + EILRG+R HFH+L+KGLT L AC A+L L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 71 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 250
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 251 LE 256
LE
Sbjct: 61 LE 62
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 124 bits (298), Expect = 4e-28
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3
Query: 510 LGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
LGLGHSYSRA+VKFNV+RVDNMII SI+LLDQLDKD+NTFSMR+REWY YHFPELV I+
Sbjct: 142 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 201
Query: 690 ENHLYTKCAEFM 725
+N Y + A+F+
Sbjct: 202 DNATYCRLAQFI 213
Score = 96.7 bits (230), Expect = 8e-20
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 FNSFSTTQVGDRCFGNINAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 390
F F+++QV N NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 47 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 101
Query: 391 EALEIQCTHTGAVPEILRGIRYHFHSLIKGLT-LKACSVARLAL 519
E L C G + EILRG+R HFH+L+KGLT L AC A+L L
Sbjct: 102 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 144
Score = 64.5 bits (150), Expect = 4e-10
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +2
Query: 83 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALE 256
+VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VALE
Sbjct: 1 HVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALE 58
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 124 bits (298), Expect = 4e-28
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +3
Query: 510 LGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
LGLGHSYSRA+VKFNV+RVDNMII SI+LLDQLDKD+NTFSMR+REWY YHFPELV I+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIIN 205
Query: 690 ENHLYTKCAEFM 725
+N Y + A+F+
Sbjct: 206 DNATYCRLAQFI 217
Score = 96.7 bits (230), Expect = 8e-20
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 FNSFSTTQVGDRCFGNINAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 390
F F+++QV N NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 391 EALEIQCTHTGAVPEILRGIRYHFHSLIKGLT-LKACSVARLAL 519
E L C G + EILRG+R HFH+L+KGLT L AC A+L L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 71 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 250
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 251 LE 256
LE
Sbjct: 61 LE 62
>AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 281
Score = 96.7 bits (230), Expect = 8e-20
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 FNSFSTTQVGDRCFGNINAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAIS 390
F F+++QV N NAVSEG++ EDL L LE LP +KK K LGV DPK+GAAI
Sbjct: 51 FCPFASSQVA---LENANAVSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQ 105
Query: 391 EALEIQCTHTGAVPEILRGIRYHFHSLIKGLT-LKACSVARLAL 519
E L C G + EILRG+R HFH+L+KGLT L AC A+L L
Sbjct: 106 EELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 90.6 bits (215), Expect = 5e-18
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 29/101 (28%)
Frame = +3
Query: 510 LGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIRE-----------WY- 653
LGLGHSYSRA+VKFNV+RVDNMII SI+LLDQLDKD+NTFSMR+R+ W+
Sbjct: 146 LGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVRQSRCGEGKAVALWFL 205
Query: 654 -----------------SYHFPELVSIVPENHLYTKCAEFM 725
YHFPELV I+ +N Y + A+F+
Sbjct: 206 MKQLGQGVTVALCREWYGYHFPELVKIINDNATYCRLAQFI 246
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 71 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 250
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 251 LE 256
LE
Sbjct: 61 LE 62
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 486 PQSVQCGTLGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHF 665
P+ + LGL HS SR R+KF+ +VD MI+ +I+LLD LDK++N + MR REWY +HF
Sbjct: 132 PREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHF 191
Query: 666 PELVSIVPENHLYTKCAE 719
PEL I+ +N Y KC +
Sbjct: 192 PELGKIISDNLTYCKCLQ 209
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 265 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 444
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 445 GIRYHFHSLIKGLTLKACSVARLALA 522
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 486 PQSVQCGTLGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHF 665
P+ + LGL HS SR R+KF+ +VD MI+ +I+LLD LDK++N + MR REWY +HF
Sbjct: 132 PREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHF 191
Query: 666 PELVSIVPENHLYTKCAE 719
PEL I+ +N Y KC +
Sbjct: 192 PELGKIISDNLTYCKCLQ 209
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 265 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 444
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 445 GIRYHFHSLIKGLTLKACSVARLALA 522
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 486 PQSVQCGTLGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHF 665
P+ + LGL HS SR R+KF+ +VD MI+ +I+LLD LDK++N + MR REWY +HF
Sbjct: 132 PREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHF 191
Query: 666 PELVSIVPENHLYTKCAE 719
PEL I+ +N Y KC +
Sbjct: 192 PELGKIISDNLTYCKCLQ 209
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 265 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 444
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 445 GIRYHFHSLIKGLTLKACSVARLALA 522
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 486 PQSVQCGTLGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHF 665
P+ + LGL HS SR R+KF+ +VD MI+ +I+LLD LDK++N + MR REWY +HF
Sbjct: 132 PREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHF 191
Query: 666 PELVSIVPENHLYTKCAE 719
PEL I+ +N Y KC +
Sbjct: 192 PELGKIISDNLTYCKCLQ 209
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 265 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 444
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 445 GIRYHFHSLIKGLTLKACSVARLALA 522
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 91.9 bits (218), Expect = 2e-18
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 486 PQSVQCGTLGLGHSYSRARVKFNVHRVDNMIIPSIALLDQLDKDVNTFSMRIREWYSYHF 665
P+ + LGL HS SR R+KF+ +VD MI+ +I+LLD LDK++N + MR REWY +HF
Sbjct: 132 PREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHF 191
Query: 666 PELVSIVPENHLYTKCAE 719
PEL I+ +N Y KC +
Sbjct: 192 PELGKIISDNLTYCKCLQ 209
Score = 48.4 bits (110), Expect = 3e-05
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = +1
Query: 265 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILR 444
A ++ +N L+ L K K + L V D KLG I E L + C H+ V E++R
Sbjct: 58 AAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMR 117
Query: 445 GIRYHFHSLIKGLTLKACSVARLALA 522
GIR LI G+ + + L LA
Sbjct: 118 GIRSQMDGLIPGVEPREMAAMCLGLA 143
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 573 MIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 573 MIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 573 MIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 30.7 bits (66), Expect = 5.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 573 MIIPSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 689
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 12 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,606,840
Number of Sequences: 237096
Number of extensions: 2309555
Number of successful extensions: 5039
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5032
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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