BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30232X (498 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 25 0.29 EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 25 0.29 AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 4.7 AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 4.7 AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 4.7 >EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 protein. Length = 237 Score = 25.4 bits (53), Expect = 0.29 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Frame = +2 Query: 347 WRCW*GE-SRSKSSRPAAVDRE-RQC 418 W CW GE SR + S A DRE R C Sbjct: 112 WNCWNGEASRYQCSPGLAYDREARVC 137 >EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 protein. Length = 274 Score = 25.4 bits (53), Expect = 0.29 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%) Frame = +2 Query: 347 WRCW*GE-SRSKSSRPAAVDRE-RQC 418 W CW GE SR + S A DRE R C Sbjct: 112 WNCWNGEASRYQCSPGLAYDREARVC 137 >AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain transcription factor Labialprotein. Length = 353 Score = 21.4 bits (43), Expect = 4.7 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = -2 Query: 440 SCRRMYNHIDVLDQQLPVLRT*T*IRLTNI 351 S + +Y H + Q P++ T T + TN+ Sbjct: 59 SPQEVYYHHQTIPQDNPIINTETGLSYTNL 88 >AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein protein. Length = 210 Score = 21.4 bits (43), Expect = 4.7 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = -2 Query: 440 SCRRMYNHIDVLDQQLPVLRT*T*IRLTNI 351 S + +Y H + Q P++ T T + TN+ Sbjct: 59 SPQEVYYHHQTIPQDNPIINTETGLSYTNL 88 >AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein protein. Length = 253 Score = 21.4 bits (43), Expect = 4.7 Identities = 9/30 (30%), Positives = 16/30 (53%) Frame = -2 Query: 440 SCRRMYNHIDVLDQQLPVLRT*T*IRLTNI 351 S + +Y H + Q P++ T T + TN+ Sbjct: 59 SPQEVYYHHQTIPQDNPIINTETGLSYTNL 88 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 109,369 Number of Sequences: 336 Number of extensions: 2194 Number of successful extensions: 8 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 122,585 effective HSP length: 53 effective length of database: 104,777 effective search space used: 11735024 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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