Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30232X
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0085 + 12108474-12108552,12108656-12108759,12109726-121099... 54 6e-08
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130... 54 8e-08
09_06_0327 + 22359524-22359602,22359732-22359835,22362073-223622... 50 1e-06
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527... 48 3e-06
04_03_0543 + 16955440-16955518,16956623-16956726,16957456-169576... 46 2e-05
04_03_0539 + 16892822-16892900,16894004-16894107,16894718-168949... 46 2e-05
04_03_0545 + 16996340-16996418,16998039-16998142,16999796-169999... 44 7e-05
07_03_0076 - 13123676-13123720,13124611-13124714,13124813-13124891 40 8e-04
07_03_0075 - 13096386-13096554,13096642-13096766,13096851-130971... 36 0.014
12_02_0029 - 12459565-12459804,12460013-12460121,12460507-124605... 31 0.68
03_06_0464 + 34126930-34127065,34127149-34127333,34127444-341276... 30 1.2
07_03_1171 - 24514096-24514228,24514399-24514446,24514495-245148... 29 1.6
06_03_0951 - 26269386-26269394,26269501-26269609,26272761-262731... 29 2.7
05_02_0072 - 6334613-6335215 29 2.7
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 28 3.6
02_05_0515 + 29689259-29689535,29689867-29690209,29690475-296907... 28 4.8
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 28 4.8
05_07_0235 + 28575293-28575551,28577346-28577521,28579838-285800... 27 6.3
03_02_0550 + 9407280-9407375,9407474-9407560,9408230-9408317,940... 27 6.3
01_01_0985 - 7788318-7789571 27 6.3
07_03_1170 - 24505743-24505875,24506087-24506475,24507133-245073... 27 8.4
02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432... 27 8.4
01_01_0237 - 1972699-1972796,1973618-1974334,1975387-1976191 27 8.4
>08_02_0085 +
12108474-12108552,12108656-12108759,12109726-12109925,
12110003-12110103,12110184-12110379,12110584-12110745,
12110856-12110937,12111741-12112004,12113047-12113174,
12113795-12113957
Length = 492
Score = 54.0 bits (124), Expect = 6e-08
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +1
Query: 106 VRAFYSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
V AF+ G++ ITG TGF+G L+EKILR PDV K+YLL+R
Sbjct: 6 VVAFFRGRSILITGSTGFLGKVLVEKILRVQPDVKKLYLLVR 47
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 291 EKLLDTNTTDIFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPT 470
EK D + + +K+ ++GD+ NLGL L ++++++ AAT +F E
Sbjct: 73 EKHGDGFESFVEEKVCTLAGDIIYENLGLDSAKLTELSNEIDIIVNGAATTNFYERYDVA 132
Query: 471 DRINPLGTR 497
N LG +
Sbjct: 133 FDSNVLGAK 141
>08_02_1566 +
27909297-27909390,27909542-27909645,27912899-27913098,
27913214-27913314,27913427-27914130,27914671-27914834,
27914941-27915100
Length = 508
Score = 53.6 bits (123), Expect = 8e-08
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +1
Query: 82 NKMTEESLVRAFYSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+++ E ++ ++ GK+ ITG TGF+G L+EKILR PDV K+YLL+R
Sbjct: 4 DRLDAERIIE-YFKGKSILITGATGFLGKILVEKILRVQPDVKKIYLLVR 52
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +3
Query: 321 IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTDRINPLGTR 497
I +K+V ++GD+ +LGL P Q L +N++V+++ AAT +F + +N LG +
Sbjct: 88 IEEKVVALAGDIIYDDLGLDPPLLQHLADNLDVIVNGAATTNFYGRYDVSLDVNVLGVK 146
>09_06_0327 +
22359524-22359602,22359732-22359835,22362073-22362272,
22362359-22362459,22362551-22363005,22363079-22363645
Length = 501
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 94 EESLVRAFYSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+E+ + ++ K+ ITG TGF+G L+EKILR PDV K+YL +R
Sbjct: 2 DEARIIEYFKNKSILITGSTGFLGKILVEKILRVQPDVRKIYLPVR 47
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +3
Query: 321 IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTDRINPLGTR 497
I +K+VP++ D+ NLGL Q L +++N++++ AAT +F E +N +G +
Sbjct: 83 IDEKVVPLAADMMHQNLGLEESTLQELAKDLNIIVNGAATTNFYERYDVALDVNVMGVK 141
>07_03_0423 +
18035688-18036572,18036659-18036978,18052618-18052724,
18053001-18053104,18054129-18054328,18054422-18054522,
18054695-18054841,18055007-18055166,18055287-18055368,
18056070-18056336,18056846-18056973,18057513-18057672
Length = 886
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 94 EESLVRAFYSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+ + V ++ K+ ITG TGF+G +EKILR PDV K++LL+R
Sbjct: 413 DAATVAGYFKDKSILITGSTGFLGKIFVEKILRIQPDVKKIFLLVR 458
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +3
Query: 327 KKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTDRINPLGTR 497
+K+ P++GD+ NLGL + L + ++++++ AAT +F E + N LG +
Sbjct: 496 EKISPLAGDIINENLGLESLEILKLSKEIDIIVNGAATTNFYERYDVSLASNVLGAK 552
>04_03_0543 +
16955440-16955518,16956623-16956726,16957456-16957655,
16958554-16958654,16959408-16959603,16960243-16960324,
16960402-16960668,16960790-16960917,16961285-16961465
Length = 445
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 118 YSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+ K ITG TGF+G L+EKILR P+V K+YLL+R
Sbjct: 10 FRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVR 47
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 321 IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQE 455
I +K+ + GDV N GL + L + V+++++ AAT +F E
Sbjct: 83 IKEKIYALPGDVMHENFGLESYEVLQLSQKVDIIVNGAATTNFME 127
>04_03_0539 +
16892822-16892900,16894004-16894107,16894718-16894917,
16896078-16896178,16897546-16897735,16898377-16898458,
16899374-16899501,16899846-16900026
Length = 354
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +1
Query: 118 YSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+ K ITG TGF+G L+EKILR P+V K+YLL+R
Sbjct: 10 FRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVR 47
Score = 35.1 bits (77), Expect = 0.032
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 321 IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQE 455
I +K+ + GDV N GL D L + V+++++ AAT +F E
Sbjct: 83 IKEKIYALPGDVTHENFGLESYDILQLSQKVDIIVNGAATTNFME 127
>04_03_0545 +
16996340-16996418,16998039-16998142,16999796-16999995,
17000186-17000228
Length = 141
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 118 YSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+ ++ ITG TGF+ L+EKILR PDV K+YLL+R
Sbjct: 10 FRDRSILITGSTGFLAKMLVEKILRIQPDVRKLYLLVR 47
Score = 36.3 bits (80), Expect = 0.014
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 321 IFKKLVPISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQE 455
I +K+ P+ GD+ N GL + L ++V+++++ AAT +F E
Sbjct: 83 IKEKVCPLPGDITHQNFGLGNSEILRLSQDVDIIVNGAATTNFME 127
>07_03_0076 - 13123676-13123720,13124611-13124714,13124813-13124891
Length = 75
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +1
Query: 118 YSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMR 231
+ + ITG TGF+ L+EKILR P V ++YLL+R
Sbjct: 10 FHSRTVLITGATGFIAKLLVEKILRLQPGVKRLYLLVR 47
>07_03_0075 -
13096386-13096554,13096642-13096766,13096851-13097117,
13097506-13097587,13097956-13098172,13098260-13098360,
13098425-13098627,13099261-13099334,13100246-13100429
Length = 473
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 330 KLVPISGDVGEANLGLSPQD-RQLLIENVNVVIHSAATLDFQENLRPTDRINPLGTR 497
K+ P++GDV N G+ + + + N+++H AAT++F E IN +G +
Sbjct: 111 KVFPLAGDVSLKNFGIGDARLAEDIRKETNIIVHMAATVNFAERYDTALAINTMGVK 167
>12_02_0029 -
12459565-12459804,12460013-12460121,12460507-12460599,
12460965-12461208,12462302-12462338
Length = 240
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 4 RRNNKSCFIIIIVNHSYI-SQDTPEGRNKMTEE 99
RR +CF+I NH ++ +QD GR KM +E
Sbjct: 124 RRTTMTCFVICKWNHDHVHTQDDKLGRKKMMKE 156
>03_06_0464 +
34126930-34127065,34127149-34127333,34127444-34127632,
34128309-34128471,34129046-34129232,34129467-34129611
Length = 334
Score = 29.9 bits (64), Expect = 1.2
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 124 GKNFFITGGTGFVGLCLIEKIL 189
G+ +TG +GF+G CL+ ++L
Sbjct: 11 GETVLVTGASGFIGSCLVRRLL 32
>07_03_1171 -
24514096-24514228,24514399-24514446,24514495-24514886,
24515637-24515849,24516245-24516414,24516515-24516629
Length = 356
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 121 SGKNFFITGGTGFVGLCLIEKILR 192
S + +TGG+G++ CLI+K+L+
Sbjct: 3 SSRPVCVTGGSGYIATCLIKKLLQ 26
>06_03_0951 -
26269386-26269394,26269501-26269609,26272761-26273149,
26273592-26273852,26275067-26275245,26275329-26275467
Length = 361
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 88 MTEESLVRAFYSGKNFFITGGTGFVGLCLIEKIL 189
M EES R+ G +TGG GF+G L++K+L
Sbjct: 1 MAEESGRRSG-GGVRVCVTGGAGFIGSWLVKKLL 33
>05_02_0072 - 6334613-6335215
Length = 200
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 342 ISGDVGEANLGLSPQDRQLLIENVNVVIHSAATLDFQENLRPTDRINPLGT 494
+ GDV A+L L LL E +N V+H AA +N + N LGT
Sbjct: 80 VRGDVASADLVL----HLLLAERINTVMHFAAHTHVDDNSFEFTKNNVLGT 126
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 112 AFYSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMRPKKGKEISN 258
A Y KN ITG GF+ + +++R P K+ +L + +SN
Sbjct: 2 AAYEPKNILITGAAGFIASHVANRLVRNYPHY-KIVVLDKLDYCSSLSN 49
>02_05_0515 +
29689259-29689535,29689867-29690209,29690475-29690746,
29691282-29691478,29691874-29692237,29692831-29692898
Length = 506
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 124 GKNFFITGGTGFVGLCLIEKILR 192
G F +TGG GFVG L ++LR
Sbjct: 11 GVRFAVTGGQGFVGSALCLELLR 33
>01_07_0248 +
42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +3
Query: 249 NIQRLEEFPKNLVFEKLLDTNTTDIFK 329
N +R+ E +N + EKL+++NTT IF+
Sbjct: 331 NQERIIETIRNAIEEKLMNSNTTRIFQ 357
>05_07_0235 +
28575293-28575551,28577346-28577521,28579838-28580041,
28580177-28580330,28580434-28580780
Length = 379
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 139 ITGGTGFVGLCLIEKILR 192
+TGG FVGL +++++LR
Sbjct: 57 VTGGISFVGLAVVDRLLR 74
>03_02_0550 +
9407280-9407375,9407474-9407560,9408230-9408317,
9408871-9408962,9409068-9409132,9409220-9409308,
9409402-9409479,9409567-9409660,9409745-9409811,
9409907-9409970,9410096-9410136,9410221-9410412
Length = 350
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 115 FYSGKNFFITGGTGFVGLCLIEKIL 189
F + +TGG GF+G L++K++
Sbjct: 31 FQANLRILVTGGAGFIGSHLVDKLM 55
>01_01_0985 - 7788318-7789571
Length = 417
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 101 P*SAPFIVGKTFS*PAGPALSAYV 172
P S P +VG + P GPALS Y+
Sbjct: 125 PVSPPSVVGGCYFQPRGPALSRYI 148
>07_03_1170 -
24505743-24505875,24506087-24506475,24507133-24507369,
24507967-24508136,24510196-24510316
Length = 349
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 121 SGKNFFITGGTGFVGLCLIEKILR 192
S +TG +G++ CLI+K+L+
Sbjct: 5 SSSRVCVTGASGYIATCLIKKLLQ 28
>02_05_1360 +
35942493-35942682,35942799-35942858,35943099-35943217,
35945405-35945449,35945598-35945676,35945777-35945838,
35945932-35946037,35946193-35946253,35947097-35947167,
35947459-35947598,35947887-35947994
Length = 346
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 139 ITGGTGFVGLCLIEKIL 189
ITG TGFVG L++K+L
Sbjct: 46 ITGATGFVGRRLVQKLL 62
>01_01_0237 - 1972699-1972796,1973618-1974334,1975387-1976191
Length = 539
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +1
Query: 79 RNKMTEESLVRAFYSGKNFFITGGTGFVGLCLIEKILRGIPDVGKVYLLMRP 234
+N + + R FY +F +T G C+IE + D+G + P
Sbjct: 327 KNGIWTYQIQRIFYHNSSFMVTNEQLTDGQCVIESFVNASSDLGLTQFKISP 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,398,959
Number of Sequences: 37544
Number of extensions: 240800
Number of successful extensions: 525
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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