Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30231
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.4  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    24   4.4  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    24   4.4  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 337 KHVR--RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGP 468
           KHV+  +   +LK  +VC+     +  +RVV  GI  SGL L +GP
Sbjct: 109 KHVKFCQFAFDLKCDSVCV---NPYHYERVVSPGIDLSGLTLQSGP 151


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 470 LLSIRARYAVFLSLCDRHLHQNFHSATSNCQNTSMMI 580
           L   +A    +L +C+  LHQ  +S     Q+T  M+
Sbjct: 37  LREAQAACVKYLGICENRLHQYNNSVYPTDQDTMCMV 73


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 470 LLSIRARYAVFLSLCDRHLHQNFHSATSNCQNTSMMI 580
           L   +A    +L +C+  LHQ  +S     Q+T  M+
Sbjct: 37  LREAQAACVKYLGICENRLHQYNNSVYPTDQDTMCMV 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,528
Number of Sequences: 2352
Number of extensions: 13528
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)