Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30229
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.63 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.83 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   3.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.4  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 383 SCTICTRDLKISKCPCPLLATPRTVC 460
           SCT+CT D K  +  C  +   +  C
Sbjct: 773 SCTVCTCDAKYLEIKCKRIYNEKQCC 798


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 23/78 (29%), Positives = 33/78 (42%)
 Frame = +1

Query: 400 KRPENLEVPLSATRDAKNSVYAMNDQTFHTPSFGDEDLIFL*YTGSMRRDQESRIRIFST 579
           KRP   E P+     + +  Y  + QT +TP    +DL+   Y    R D ES+  +   
Sbjct: 88  KRPPPDE-PIDDYEPSFDLFYYPSRQTLYTPVQYFKDLVAEAYVSPFRIDNESQELL--- 143

Query: 580 HNYTTLRRSRHDESSTGR 633
             Y +  R R    S GR
Sbjct: 144 -KYPSFARGRSLYDSRGR 160


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/73 (20%), Positives = 30/73 (41%)
 Frame = +1

Query: 337 MECPQTASENHDRSYKLYNMYKRPENLEVPLSATRDAKNSVYAMNDQTFHTPSFGDEDLI 516
           +E  +  +E+ D   K Y  + +     + L    D++N         +HT + GDE   
Sbjct: 410 LELFEELAEDKDGYKKFYEQFSK----NIKLGIHEDSQNRAKLSELLRYHTSASGDEACS 465

Query: 517 FL*YTGSMRRDQE 555
              Y   ++ +Q+
Sbjct: 466 LKDYVSRIKPNQK 478


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 17  APGHGLQPTMGDYTQL 32


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 540 APGSGVQNTHIQYTQL 587
           APG G+Q T   YTQL
Sbjct: 61  APGHGLQPTMGDYTQL 76


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 621 GFIMPTAAQRGVIVCTEYA 565
           GF+ PT A+RG I     A
Sbjct: 330 GFVHPTVAKRGSITSKNVA 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,775
Number of Sequences: 336
Number of extensions: 4105
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)