Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30229
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          29   0.11 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.4  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 638  APPGGAPSYQQPLYLQEPHTPVTTHSGASAPA 733
            +P GG+P  + P +   P TP    +G S+PA
Sbjct: 1103 SPMGGSPRPETPAFPVTPRTPYGLSNGTSSPA 1134


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = -1

Query: 403  SCTYCTACMIYHDFRKPFVDTPFRFVHRTRKIMTVHLQHQVLIFLKGYFDPAVAAHKYLA 224
            +C  CT C      ++P  D P + V + R      + +   I +KG    AV    Y++
Sbjct: 1392 NCVKCTRCRPKL-IQQPMADLPEQRVRQARPFSISGVDYAGPIMVKGTHRRAVPTKGYIS 1450

Query: 223  I 221
            I
Sbjct: 1451 I 1451


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 507 RFDIPLIHGQHAPGSGVQNTHIQYTQLHHAAPQ 605
           R +  L H QH PG+GVQ      +Q  H   Q
Sbjct: 225 RMEYLLPHQQHPPGAGVQGAGPIPSQQKHQQHQ 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,231
Number of Sequences: 2352
Number of extensions: 19919
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)