Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30229
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical pr... 32 0.48
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 32 0.48
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 32 0.48
AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin re... 32 0.48
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 31 0.84
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 31 0.84
Z82059-4|CAB04877.1| 314|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical pr... 28 7.8
AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein... 28 7.8
>U21309-6|AAT92086.1| 541|Caenorhabditis elegans Hypothetical
protein C13B9.4c protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -1
Query: 592 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNLRHQMKECEMS 476
WCN Y + W P P CP +KG+ ++ K+C +S
Sbjct: 73 WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -1
Query: 592 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNLRHQMKECEMS 476
WCN Y + W P P CP +KG+ ++ K+C +S
Sbjct: 73 WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -1
Query: 592 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNLRHQMKECEMS 476
WCN Y + W P P CP +KG+ ++ K+C +S
Sbjct: 73 WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116
>AY314777-1|AAQ84884.1| 541|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1B protein.
Length = 541
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -1
Query: 592 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNLRHQMKECEMS 476
WCN Y + W P P CP +KG+ ++ K+C +S
Sbjct: 73 WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKNITKDCHVS 116
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -1
Query: 592 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNLRHQMKECE 482
WCN Y + W P P CP +KG+ ++ +K C+
Sbjct: 73 WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKYIVKRCD 114
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -1
Query: 592 WCNCVY*ICVFWTPDPGAC-----CPCIKGISNLRHQMKECE 482
WCN Y + W P P CP +KG+ ++ +K C+
Sbjct: 73 WCNATYDTVLCWPPTPANSSVTLQCPHMKGLDPNKYIVKRCD 114
>Z82059-4|CAB04877.1| 314|Caenorhabditis elegans Hypothetical
protein T27E9.8 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 277 IFLKGYFDPAVAAHKYLAIDFSQKVHFVVYYDNVIIRSSYQ-RLSMKFK 134
++L YF + HK +A D+SQ + ++ +N + +Q +S FK
Sbjct: 132 LYLTSYFMEDIEFHKKIAKDYSQHFNELILENNFLESRKFQTAISSNFK 180
>Z78540-6|CAD30431.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 638 APPGGAPSYQQPLYLQEPHTPVTTHS 715
APP G P Y + L L +P P TT S
Sbjct: 223 APPVGGPLYGKRLSLFQPRKPSTTSS 248
>Z78540-5|CAB01738.2| 793|Caenorhabditis elegans Hypothetical
protein C33G3.1a protein.
Length = 793
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 638 APPGGAPSYQQPLYLQEPHTPVTTHS 715
APP G P Y + L L +P P TT S
Sbjct: 129 APPVGGPLYGKRLSLFQPRKPSTTSS 154
>Z72501-3|CAD30430.1| 887|Caenorhabditis elegans Hypothetical
protein C33G3.1b protein.
Length = 887
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 638 APPGGAPSYQQPLYLQEPHTPVTTHS 715
APP G P Y + L L +P P TT S
Sbjct: 223 APPVGGPLYGKRLSLFQPRKPSTTSS 248
>AJ133838-1|CAB44432.1| 793|Caenorhabditis elegans DYC-1 protein
protein.
Length = 793
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 638 APPGGAPSYQQPLYLQEPHTPVTTHS 715
APP G P Y + L L +P P TT S
Sbjct: 129 APPVGGPLYGKRLSLFQPRKPSTTSS 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,962,954
Number of Sequences: 27780
Number of extensions: 392490
Number of successful extensions: 1111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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