Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30229
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.97 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   3.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.0  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 524 NTRAACAGIRSPEYAYSVHTITPRCAAVGMMNPA 625
           N+RA       P+  Y+V    PRCA     +P+
Sbjct: 132 NSRANTYNFDYPQVPYTVKNFHPRCAVNNYNDPS 165


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 662 KKEHHLVGPS 633
           +KEHHL GPS
Sbjct: 197 RKEHHLEGPS 206


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 91  LSAIRSTLAAPRFFA 135
           L AIR+TL A  FFA
Sbjct: 461 LKAIRATLKASPFFA 475


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 91  LSAIRSTLAAPRFFA 135
           L AIR+TL A  FFA
Sbjct: 376 LKAIRATLKASPFFA 390


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +1

Query: 91  LSAIRSTLAAPRFFA 135
           L AIR+TL A  FFA
Sbjct: 695 LKAIRATLKASPFFA 709


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,412
Number of Sequences: 438
Number of extensions: 4921
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)